Protein

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Genbank accession
WAK44639.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MDRLFDVNLLDDAGWTDGEEWADCNPAQDLERVYKRVYTGSEEDDPDYRVNPGDNFYIGSHPSQVRDWTPRTLPWDLNLTKGQNGNPLSFYFGLQVGEREIDTNLDNHSPWMQNVSGDFIILGADYHRFFGLKVKDSDPVLKLNSNNKGSEVHGAVLSNAGLIDTQGYAMFDWILRKLTFINTIFKALDIPLGSSNVSTQDFDITGTGDCGIAIRAGHSDMEVIGGTIINENHLFNENFTLLQGLEIEAGSEAVVRYVSTGGFSGNGFKFSCEVNVKGLNSDHDGAGIEFLEVSTARDCMVSWTRQLGGDSFAYYLHKDGELNNCGCNLDEVGGLGVIVIGPNATVTINGGDYKALLPLPFLSAQGDCTVVLNNVMVNDVLYNETIELAEGEAWRGEKAEVTVDTLQVKANKTLNLPYMHIPQLDNAIAVQGTERPFQSVVTLPSGARVLPTEEGSLRYMPAEAWLHLDPGETAIDYFRYSTDELIYMHKFIINASDEVGAKVVQPDAFSGSGWSKSGGNYYAAGTSNPLSANYNFEEDEVYQISLKLVDKKSGSVTPKIGSKLGQYSHSIEGTEVWLIRAPANATQVQVTASGYKGNVQNIYVRKLLRTEMPSVPTLEGSVNGNEVNLSWKLPPVDRLKFRNTPDVHIQNQEMTANDADGYRGYSSGSHRHYLFENVSVQNRRNGVTLKGAESLEIDGMDFTGGYRGTNETWQVAVVPEYRTPYCKISQLGNITADLELESNYGNYNSQFGNCDILVINAPYWGVGSWGEVGEIYTCHVYNLDGKNSTDAVTDLKRVTEINNSTLEGSCKIVRTHRRGAAILNNSEFKSTVGTRETFAPSHSPAYFELWNCYADGERCVTKDQMNEQKKGSGFYYSDRGLLAGNRNSIEVLKTYPTLDDLNRFAMTDMEFQVSSNGGSSWSPLDVPNVDLPGVIGCFKRTFSLSSGTYQIRCRCYNGALIGAWSNTISITV
Physico‐chemical
properties
protein length:972 AA
molecular weight: 107231,09450 Da
isoelectric point:4,83367
aromaticity:0,09877
hydropathy:-0,36924

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WAK44639.1
1 972
Domain Start End Length (AA) Confidence
N-terminal 1 18 18 0,8026
Central domain 19 535 518 0,8695
C-terminal 536 972 436 0,1789
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-18
Central
19-535
C-terminal
536-972

Taxonomy

  Name Taxonomy ID Lineage
Phage Alteromonas phage vB_AmeP_PT11-V19
[NCBI] 		2996182 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Alteromonas mediterranea
[NCBI] 		314275 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Alteromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WAK44639.1 [NCBI]
Genbank nucleotide accession
OP751378.1 [NCBI]
CDS location
range 10677 -> 13595
strand +
CDS
ATGGATAGACTATTTGACGTAAACCTACTAGACGACGCGGGTTGGACCGACGGTGAAGAATGGGCTGATTGTAACCCTGCTCAAGATTTAGAACGGGTATACAAACGTGTTTATACAGGCAGTGAGGAAGACGATCCTGATTATCGCGTAAACCCCGGGGATAACTTTTACATCGGTTCACATCCTAGCCAAGTAAGGGATTGGACACCTCGCACTTTACCGTGGGATTTAAACTTAACGAAAGGCCAGAATGGTAATCCGCTTTCATTCTACTTTGGCTTGCAAGTCGGTGAGCGAGAGATAGACACGAACCTAGATAATCACAGTCCTTGGATGCAAAACGTGTCGGGCGATTTCATTATTCTAGGTGCAGACTATCACCGTTTCTTCGGGCTAAAAGTCAAAGACTCCGACCCTGTTTTAAAACTTAATTCCAATAACAAAGGCAGTGAAGTTCACGGTGCAGTATTGAGCAATGCTGGTCTTATCGACACACAAGGTTACGCTATGTTTGACTGGATTTTACGAAAACTCACGTTCATTAATACGATATTTAAAGCACTAGATATACCGCTAGGCTCTAGCAATGTATCGACCCAAGACTTTGATATTACAGGTACAGGTGATTGTGGTATCGCAATCCGTGCTGGTCATTCAGATATGGAAGTTATTGGGGGTACGATAATTAATGAAAACCACTTATTTAATGAAAACTTCACGCTTTTACAAGGGCTAGAGATTGAAGCTGGTAGCGAAGCCGTAGTTCGTTATGTATCTACCGGCGGATTCAGCGGTAACGGTTTTAAGTTTAGCTGCGAAGTAAACGTAAAGGGTCTTAACTCTGATCATGACGGTGCAGGGATTGAGTTTCTTGAAGTCTCGACAGCAAGAGATTGCATGGTAAGTTGGACTCGTCAACTAGGGGGTGACAGTTTTGCTTATTATTTACATAAAGATGGGGAGCTAAATAACTGCGGCTGCAACCTTGATGAAGTAGGTGGTTTAGGCGTAATTGTTATTGGCCCTAATGCTACGGTTACTATTAACGGTGGTGATTATAAAGCTTTGCTGCCTCTACCGTTCTTATCAGCCCAAGGTGATTGCACAGTAGTTTTGAATAATGTCATGGTAAATGATGTTCTTTACAACGAAACTATCGAACTTGCTGAGGGTGAAGCATGGCGTGGGGAGAAAGCTGAAGTAACAGTAGATACGCTACAAGTTAAAGCTAACAAAACTCTAAACCTACCTTATATGCACATCCCTCAACTGGATAATGCTATTGCTGTTCAAGGTACTGAAAGACCTTTCCAAAGCGTAGTTACTTTACCTAGTGGAGCAAGAGTATTACCTACTGAAGAAGGTTCACTTCGCTACATGCCTGCAGAAGCATGGCTGCATTTAGACCCGGGCGAAACAGCAATTGATTACTTCCGTTATTCTACGGACGAACTTATTTATATGCATAAGTTCATCATTAATGCTTCGGACGAAGTAGGCGCAAAGGTAGTTCAGCCAGATGCCTTTAGTGGTTCTGGTTGGTCTAAAAGTGGCGGAAACTATTACGCTGCGGGTACAAGCAACCCGTTAAGCGCAAACTATAACTTTGAAGAAGATGAGGTCTATCAAATCTCGCTAAAGCTAGTAGATAAAAAAAGCGGCTCAGTCACACCGAAAATCGGCAGTAAATTAGGGCAATACAGCCACAGTATTGAAGGTACAGAAGTATGGCTTATTCGTGCGCCAGCTAATGCGACACAGGTTCAAGTAACGGCATCAGGTTACAAAGGTAACGTCCAAAATATCTACGTTCGTAAACTGCTAAGAACAGAAATGCCGAGTGTGCCAACGCTTGAAGGTTCAGTAAACGGCAATGAAGTGAATCTTTCTTGGAAGCTGCCGCCAGTAGACCGACTTAAGTTCCGTAACACACCGGATGTACATATCCAAAATCAAGAAATGACTGCTAACGATGCTGATGGTTATAGAGGGTATAGCAGTGGTTCACATCGACATTATTTATTTGAAAACGTTTCAGTTCAAAACCGTCGTAATGGGGTAACACTTAAAGGTGCAGAATCGCTAGAAATAGATGGTATGGATTTTACAGGAGGTTACCGGGGAACAAACGAAACATGGCAAGTAGCAGTAGTTCCTGAGTACCGTACCCCATACTGTAAAATTTCTCAGTTAGGTAACATAACAGCTGATTTAGAGCTTGAGTCTAACTACGGTAACTACAATTCGCAGTTCGGTAACTGCGACATTCTAGTTATTAATGCACCTTATTGGGGCGTAGGTTCATGGGGTGAAGTAGGTGAAATATACACTTGCCACGTTTATAATTTAGATGGTAAGAATTCTACAGACGCAGTAACTGATTTAAAGCGAGTTACTGAAATAAATAATAGTACCTTAGAAGGTTCTTGTAAGATTGTCCGTACTCACCGAAGAGGTGCTGCAATACTCAATAACAGCGAGTTCAAATCTACTGTAGGAACAAGAGAAACTTTTGCTCCAAGCCACAGCCCTGCTTATTTTGAACTTTGGAACTGCTACGCAGATGGAGAGCGTTGCGTTACTAAAGACCAAATGAATGAACAAAAGAAAGGTTCTGGTTTTTACTACTCCGACAGAGGCCTGTTGGCTGGTAATAGAAATTCCATAGAAGTTTTAAAAACTTACCCAACATTAGACGATCTTAACCGTTTTGCTATGACCGATATGGAATTTCAAGTATCGAGTAACGGTGGTTCTAGTTGGTCTCCTTTAGACGTTCCTAATGTTGATTTGCCCGGGGTTATCGGTTGTTTCAAGCGCACCTTTTCACTTTCATCAGGCACATACCAGATCAGATGCCGTTGCTATAATGGTGCGCTTATAGGCGCGTGGTCTAACACAATTTCAATTACAGTATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
b5c90d1e1a68e256bfd2d02d162b695a477f8fc5ede956080c79cbd016b0718c
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2771
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Structural and functional assessment of homologous host recognition modules used by distant Alteromonas phage families Gonzalez-Serrano,R., Rosselli,R., Roda-Garcia,J.J., Martin-Cuadrado,A.B., Rodriguez-Valera,F. and Dunne,M. 2023-03-07 — GenBank