Protein

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Genbank accession
YP_010669284.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MSELNAGKLRATSGVVFPTFDNSNRPSSPEIGQTIFNSEEENAQLWDGSEWIDLGSGGRKDGSSPDKAALSAAAILLEVPGAPDGVYWIDLPQIGPTQVYCIMNTAYDGGGWMMAMKATRGSTFTYFSNYWTDNTTTLNPSQANINDGDAKFQTFNYFAARDLLAVWPDLNPNSGCISVSRGHIWLQNAFNGGVRTTLPSFFSTVDELFIGDAAQFCGVGQFSQQKDVRFYGFNYKATGAREADSRCRWGFGWNENGGGLYPNANEASPDVAGGIGLIHRGGAQYSAGDYIGCCQNVTGFNRTARVEVYVR
Physico‐chemical
properties
protein length:311 AA
molecular weight: 33722,84170 Da
isoelectric point:4,75870
aromaticity:0,12540
hydropathy:-0,34341

Domains

Domains [InterPro]
DC_0326
STR
4–305
DC_0326
IPR014716
Unmapped
59–149
IPR014716
NF040941
Unmapped
71–114
NF040941
IPR036056
STR
76–134
IPR036056
YP_010669284.1
1 311
Architecture
STR
STR 4-305 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010669284.1
1 311
Domain Start End Length (AA) Confidence
N-terminal 1 65 65 0,5176
Central domain 66 264 200 0,0276
C-terminal 265 311 46 0,9961
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-65
Central
66-264
C-terminal
265-311

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-H9-2
[NCBI] 		2783669 Uroviricota > Caudoviricetes > Pantevenvirales > Yushanluvirus > Yushanluvirus satich
Host Synechococcus sp. WH 8102
[NCBI] 		84588 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010669284.1 [NCBI]
Genbank nucleotide accession
NC_070960 [NCBI]
CDS location
range 43866 -> 44801
strand +
CDS
ATGTCAGAACTCAATGCTGGTAAATTAAGAGCTACTTCAGGAGTAGTATTTCCAACTTTTGATAATAGTAATCGACCATCATCTCCTGAAATTGGTCAAACTATTTTCAATAGTGAAGAAGAAAATGCTCAACTTTGGGATGGATCTGAATGGATTGATTTGGGTTCTGGTGGCAGGAAAGATGGTTCCAGTCCAGATAAAGCAGCTTTATCTGCAGCTGCTATTCTATTAGAAGTTCCTGGAGCACCTGATGGTGTCTATTGGATCGATCTTCCTCAGATAGGTCCAACTCAAGTCTATTGCATTATGAATACTGCTTATGATGGTGGTGGTTGGATGATGGCAATGAAAGCTACCAGAGGATCTACCTTTACATATTTCTCCAACTATTGGACAGACAATACAACTACATTAAATCCATCTCAAGCTAATATTAATGACGGCGATGCTAAATTTCAAACTTTCAACTATTTTGCCGCTAGAGATTTATTAGCAGTTTGGCCAGACCTTAATCCTAATAGTGGTTGTATTTCTGTAAGTAGAGGACATATTTGGTTACAAAATGCTTTTAATGGTGGTGTGAGAACTACTCTCCCATCTTTCTTTAGTACAGTAGATGAATTGTTTATTGGAGATGCTGCTCAATTCTGTGGAGTGGGTCAATTCTCTCAACAGAAAGACGTAAGATTTTATGGTTTTAATTATAAAGCAACTGGAGCAAGAGAAGCTGATAGTAGATGTCGCTGGGGATTTGGTTGGAATGAAAATGGTGGTGGATTATATCCAAATGCTAACGAAGCTAGTCCTGATGTTGCAGGTGGAATTGGATTAATTCATAGAGGTGGTGCTCAATATTCTGCTGGTGATTATATTGGATGTTGTCAAAATGTAACTGGATTTAATAGAACAGCAAGGGTGGAGGTATACGTCCGATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
46f3df705826e594e46d885cf5d11961ef392a4acfa6801aa3a8c3d125250c48
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6740
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Isolation and Genome Sequence of a Novel Cyanophage S-H9-2 from the Yellow Sea, China Jiang,T. and Luo,L. 2019-04-04 — GenBank