Protein

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Genbank accession
QYW02392.1 [GenBank]
Protein name
carbohydrate-binding protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MRQWILKNNLSSGELSPLLWTRTDIQQYANGAKKLLNALPLVEGGAKKRPGTKFRSIFAGALRLIPFIANSENTYLLILGVSFLKVYNPRTYAVVYEAVTPYNTAQKVREVQYAHTKYRMYFVQGDTPVQRLLCSADFTNWQFAAFTFGVNPNDELGSTPNVALSPSGTEVGKVISLTASSFPNWTNTETYLTGDRVIHTSKTWRATADNKGVEPSATTPEWEEVTNEAANVFTPSNVGSIIEINGGQVKITQYVDPSRVNGEVLVKLTSAVQAIAKSWVLKSIAFSATAGYPKAVCFFKQRLVFANTKTSPNQMWFSRIGDDGNFLETTQDADAFSIASSSAQSDNILHLSQRGGVVALTGGAEFLINSQGPLTPASAQIDEHTSYGVQANVKPCRVGNELLFVQRGGERLRAMSYRYEVDGLVSPELSQIAPHIPENHAGIKELTFQQTPNSIVWIVMGDGAVSSITLNRDQEMNAWSQHDFGGQVLSICALPTGLGEDQCFMLTNRKGSTVLEEFSESAQSDCEFDINVTNGVGSILNLDIQVLDNPLVNFNNADGYFYSNYTVSGTNINLSNTDLTQTVHLGQPFKTEIDLLPPDFSQVPTTAMFHKIQVHEMAIFLNASVGGYINGQELSTKYYNQSAFVNLPYTGYVVDSFVGWQSLHELEVKITHDKPMPLHMQSISMLVSINEK
Physico‐chemical
properties
protein length:692 AA
molecular weight: 76142,89570 Da
isoelectric point:5,47521
aromaticity:0,09682
hydropathy:-0,17471

Domains

Domains [InterPro]
DC_0058
STR
2–692
DC_0058
G3DSA:2.10.10.20
ATT
167–228
G3DSA:2.10.10.20 IPR058003
IPR036573
STR
179–225
IPR036573
IPR003610
CBM
182–225
IPR003610
cd12215
STR
183–224
cd12215
QYW02392.1
1 692
Architecture
STR
ATT
STR
STR 2-166 | ATT 167-228 | STR 229-692
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QYW02392.1
1 692
Domain Start End Length (AA) Confidence
N-terminal 1 167 167 0,9845
Central domain 168 375 209 0,0274
C-terminal 376 692 316 0,2475
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-167
Central
168-375
C-terminal
376-692

Taxonomy

  Name Taxonomy ID Lineage
Phage Alcaligenes phage Piluca
[NCBI] 		2859649 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Alcaligenes faecalis
[NCBI] 		511 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QYW02392.1 [NCBI]
Genbank nucleotide accession
MZ326864 [NCBI]
CDS location
range 24820 -> 26898
strand +
CDS
ATGAGACAGTGGATCCTAAAAAATAACCTGAGTTCTGGTGAATTAAGTCCGTTACTTTGGACTCGTACAGACATTCAGCAATACGCAAACGGTGCAAAAAAATTACTTAATGCATTGCCTTTGGTTGAAGGTGGGGCAAAGAAACGACCAGGCACAAAGTTTCGTTCTATTTTTGCAGGTGCATTACGTTTAATTCCGTTTATTGCAAACTCAGAAAACACCTATTTGCTTATCCTTGGTGTGTCTTTCCTTAAGGTTTACAACCCAAGAACTTATGCAGTTGTTTATGAAGCTGTGACACCTTATAACACGGCCCAAAAAGTACGTGAAGTACAGTATGCACACACTAAATACCGCATGTATTTCGTTCAAGGTGATACACCTGTACAGCGCTTGCTGTGTTCTGCCGACTTTACTAACTGGCAATTTGCGGCTTTTACCTTTGGTGTGAACCCTAATGATGAGTTGGGCAGCACTCCAAACGTAGCTTTGTCGCCATCCGGTACAGAAGTTGGGAAAGTTATTTCATTAACTGCTTCATCTTTCCCAAACTGGACAAATACAGAGACTTACTTAACTGGTGATCGGGTTATTCACACTAGTAAGACTTGGCGAGCAACCGCAGACAATAAGGGAGTAGAGCCTTCTGCGACTACACCAGAATGGGAAGAAGTAACTAACGAAGCTGCAAACGTTTTTACACCTTCAAATGTAGGTTCAATTATTGAAATTAATGGTGGGCAAGTAAAAATAACTCAATATGTAGACCCTTCTCGTGTAAATGGTGAAGTTTTAGTAAAACTAACTTCTGCTGTTCAAGCTATTGCAAAGTCTTGGGTTTTAAAAAGTATCGCATTTAGTGCTACAGCGGGTTACCCAAAGGCAGTGTGCTTCTTTAAACAGCGCTTAGTATTTGCTAATACGAAAACAAGCCCTAACCAGATGTGGTTTAGCCGGATTGGTGATGACGGCAATTTCTTAGAGACAACTCAAGACGCAGATGCGTTTAGCATTGCTTCAAGTTCAGCCCAATCTGACAATATTTTGCACCTGTCACAACGTGGTGGTGTGGTTGCATTAACTGGTGGAGCTGAGTTTCTAATTAATTCTCAAGGACCTTTAACGCCAGCTTCAGCACAGATTGATGAGCACACTTCTTATGGTGTTCAGGCAAATGTTAAGCCTTGCCGCGTGGGTAATGAGCTGCTCTTTGTGCAACGTGGTGGTGAGCGCTTACGTGCCATGTCGTACCGTTATGAAGTTGACGGGCTTGTCTCGCCTGAATTGTCTCAAATTGCCCCACATATACCTGAAAACCATGCAGGTATTAAAGAATTAACATTCCAGCAAACACCAAACTCTATTGTATGGATTGTTATGGGTGATGGTGCAGTCTCAAGTATCACACTAAACCGTGATCAGGAAATGAATGCTTGGTCTCAGCATGATTTTGGTGGTCAGGTATTGTCAATTTGTGCCTTGCCAACGGGCTTAGGTGAAGATCAGTGTTTCATGCTTACTAATCGCAAGGGCTCTACAGTTTTAGAAGAGTTTAGCGAGTCTGCACAGAGTGATTGTGAATTTGATATCAACGTAACTAATGGCGTTGGATCTATCTTAAATCTTGATATTCAGGTTTTAGATAATCCACTGGTTAATTTTAATAATGCGGATGGATATTTCTATTCAAATTACACAGTAAGTGGCACCAACATAAATCTATCTAACACTGATCTAACCCAAACAGTACACCTTGGCCAACCGTTTAAAACTGAAATCGACCTATTGCCACCAGACTTTAGCCAAGTGCCAACAACTGCAATGTTTCATAAGATTCAGGTGCATGAAATGGCTATCTTTCTGAATGCATCAGTCGGTGGATATATCAATGGGCAAGAGTTATCTACCAAGTATTACAACCAATCAGCGTTCGTAAACTTGCCTTATACCGGCTATGTAGTCGATTCATTTGTTGGTTGGCAATCATTACATGAACTTGAGGTCAAGATAACACACGACAAACCTATGCCTTTACACATGCAAAGTATCTCTATGTTGGTATCAATTAATGAGAAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
e7a5808d832a81d0c5c9838def2ea313b91f3aea6de67ca780025fe493859882
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8816
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Alcaligenes faecalis phage Piluca Wan,J., Yu,Z., Clark,J., Burrowes,B., Liu,M. and Young,R. — — GenBank