Protein

View in Explore
Genbank accession
WNT48324.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,77
Protein sequence
MAGVTFPTVKVSDLPTAVTVSGGDYVVADQSDTTRKASLDTIISRMGLMKVVFFSEGGFLESKKDLAYFETDGKYYTWNGTYPKTIPMASSPGSTGGISSNAWQEFGTGGGGGSTGKVVNLGNVQGTITCNLTLGDTFVANLTAGQCVVGITNPSTAQGISQSFTLSLTQGTGANLVSWPSNIKWNYGRLPVLSYKTGVRDIFQFVTYDGGNTWFGSLIMAGVE
Physico‐chemical
properties
protein length:224 AA
molecular weight: 23544,18660 Da
isoelectric point:5,43878
aromaticity:0,10714
hydropathy:0,00312

Domains

Domains [InterPro]
DC_1864
STR
8–224
DC_1864
G3DSA:2.10.10.80
ATT
51–105
G3DSA:2.10.10.80
IPR040775
RBD
54–107
IPR040775
WNT48324.1
1 224
Architecture
STR
ATT
STR
STR 8-50 | ATT 51-105 | STR 106-224
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WNT48324.1
1 224
Domain Start End Length (AA) Confidence
N-terminal 1 207 207 0,6809
Central domain 208 213 7 0,0017
C-terminal 214 224 10 0,9743
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-207
Central
208-213
C-terminal
214-224

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SPLA5a
[NCBI] 		3077601 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica
[NCBI] 		28901 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WNT48324.1 [NCBI]
Genbank nucleotide accession
OR413583.1 [NCBI]
CDS location
range 132554 -> 133228
strand -
CDS
ATGGCAGGAGTTACTTTTCCAACAGTGAAGGTCTCTGACCTTCCTACTGCCGTCACCGTCTCTGGCGGTGACTATGTTGTTGCCGATCAGTCTGACACCACACGAAAAGCATCTCTGGATACAATCATTTCCAGAATGGGGCTGATGAAGGTGGTGTTCTTCTCAGAGGGAGGATTCCTTGAGTCTAAAAAGGATCTCGCGTACTTTGAAACAGACGGCAAATATTACACATGGAACGGTACTTATCCAAAGACAATTCCAATGGCATCGTCTCCAGGATCAACTGGAGGTATTAGCTCAAACGCTTGGCAAGAGTTCGGTACAGGCGGGGGTGGGGGTTCTACAGGAAAGGTCGTTAATCTGGGGAACGTGCAGGGTACTATCACCTGTAATTTGACTCTTGGGGACACCTTTGTAGCAAACCTGACCGCAGGACAGTGCGTGGTGGGGATCACTAACCCATCGACGGCACAAGGGATATCTCAGTCGTTCACTTTGTCCCTGACTCAAGGCACTGGTGCGAACCTAGTTTCTTGGCCCAGCAACATTAAATGGAATTACGGACGGCTACCAGTTCTCTCATATAAAACCGGAGTCCGGGACATTTTCCAATTCGTCACTTATGACGGAGGGAATACTTGGTTCGGCTCACTGATTATGGCAGGAGTTGAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
82ab749735214dca7cb6fe5f9f200e3750a1637fbf123a914d19a2804ae5589c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9214
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Collateral sensitivity increases the efficacy of a rationally designed bacteriophage cocktail to control Salmonella enterica Acton,L.J. 2024-03-19 — GenBank