Protein

View in Explore
Genbank accession
AXC36548.1 [GenBank]
Protein name
regulator of chromosome condensation-like protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MLPFARMVKYGNIAPVPVVPTIKDFKIGFSHEVLLDSAGDAWGIGYNTDGQLGFLDANTNSLGVWSKIYTDVRLIGVTARYTVVVTNNNRILYAGNNLISSTTTLGWTDITASMGPVAVDSIDALYCTDGMMHIKTSDGSLYAYGRNMNANSGVTGGVISVATKVNLPSAVNDMRYTFSYGSVLCRLDTTSIYAWGRNTNGELGQGNTTAIVTPKLLSGASIAMGTSYNATAIVSGSASLVTCGGQNSGQLGNGITTDGNVYVYAARTYPGDLNTIRSPVDCSTTYTSAFMSPDGIYYTGANRSMFGGISGAATVGVYTKCSDLPITYSNIIQWGSGTIGGAICSSTELYQCGIGRYIAGDGASTTRYGFRKTPLPWDVY
Physico‐chemical
properties
protein length:380 AA
molecular weight: 40047,61080 Da
isoelectric point:6,69776
aromaticity:0,10000
hydropathy:0,05053

Domains

Domains [InterPro]
DC_0433
ATT
1–113
DC_0433 IPR009091
IPR009091
STR
8–172
IPR009091 IPR000408
IPR009091
STR
15–219
IPR009091
IPR051553
Unmapped
22–271
IPR051553
DC_0433
ATT
95–255
DC_0433
IPR000408
STR
192–221
IPR000408
AXC36548.1
1 380
Architecture
ATT
STR
ATT 1-255 | STR 256-379 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AXC36548.1
1 380
Domain Start End Length (AA) Confidence
N-terminal 1 286 286 0,0334
Central domain 287 369 84 0,4638
C-terminal 370 380 10 0,9459
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-286
Central
287-369
C-terminal
370-380

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage UB
[NCBI] 		2268588 Uroviricota > Caudoviricetes > Asteriusvirus >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXC36548.1 [NCBI]
Genbank nucleotide accession
MH383160 [NCBI]
CDS location
range 223694 -> 224836
strand +
CDS
ATGTTACCTTTTGCAAGAATGGTTAAGTACGGGAATATAGCACCAGTTCCAGTAGTTCCTACAATAAAAGATTTTAAGATTGGCTTTTCACATGAAGTGTTATTGGACAGTGCAGGTGATGCATGGGGTATTGGATACAATACAGATGGGCAGTTAGGCTTTTTGGATGCAAATACCAATTCACTAGGTGTGTGGTCTAAGATATATACTGATGTTCGATTAATTGGAGTTACTGCTAGATATACAGTGGTAGTTACTAATAATAATAGAATCCTTTACGCAGGAAATAACTTAATTTCTAGTACTACTACTCTTGGGTGGACCGATATAACTGCCAGTATGGGTCCGGTTGCGGTGGATAGCATCGATGCATTATATTGCACAGATGGTATGATGCATATTAAAACTTCAGATGGTTCTTTATATGCATATGGTCGTAACATGAACGCAAACAGTGGTGTTACTGGTGGTGTTATTAGTGTTGCAACTAAGGTTAATTTGCCTTCTGCTGTAAATGACATGCGATATACGTTTAGTTATGGTTCAGTACTATGTCGATTGGATACGACTTCTATATACGCATGGGGACGAAACACAAATGGTGAATTAGGCCAGGGTAATACAACAGCTATCGTTACCCCAAAACTATTGTCTGGTGCTTCTATTGCAATGGGTACTTCGTATAATGCTACTGCAATTGTTTCTGGTTCTGCATCGTTAGTTACGTGTGGTGGTCAGAACAGTGGTCAGTTGGGTAATGGTATTACTACTGATGGTAATGTTTACGTATATGCTGCTAGAACATACCCAGGCGATCTTAATACTATAAGAAGTCCAGTGGATTGTAGTACAACGTACACCTCTGCATTTATGAGTCCAGATGGTATATATTACACTGGTGCTAACCGAAGCATGTTTGGTGGTATTAGTGGTGCTGCTACCGTTGGTGTATATACTAAATGTAGTGATTTACCAATAACATATTCTAATATAATTCAGTGGGGTAGTGGTACTATTGGTGGTGCTATATGTAGTAGTACAGAGTTATACCAATGTGGCATCGGTCGATACATTGCTGGCGATGGTGCGAGCACAACCAGGTATGGATTTAGGAAGACACCATTACCTTGGGATGTTTATTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
46e011dcc9ccd6cef4302bca5b478096438b530313ce067c5657a6999c86a9cf
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8625
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization Of A New Bacterial Virus From Orangutan (Pongo pygmaeus) Ahmad Hisham,U.B., Ramli,N.A., Mohamad Zawawi,N.A. and Mat Arip,Y. 2008-12 — GenBank
Genome Assembly Of Bacteriophage Specific To Escherichia coli 0157:H7 Ahmad Hisham,U.B., Ramli,N.A., Mohamad Zawawi,N.A. and Mat Arip,Y. 2019-07 — GenBank