Protein

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Genbank accession
YP_009133763.1 [GenBank]
Protein name
major head protein
RBP type
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MAFYYPEGIFGPVCDVIRPEADIARDGRGALAEPDDREITLELDGDDDDYGPTNPVIIKRIRCKKRSDGTYYDCIYEWLNDTIFDDWERCIAPQAECYDWGDRSVRDLRLDEDFFIPDIGPDACFPFDPDINIRNNAFFSANGERVLMAARERSSPVTFPVSSRARFLISNNNVQASFAGTLSYLITDPSINLRVNGTSTRNWGNGSGAFGGFVFPNGGGDKYLAFGNPGTTPFSNAQVNRLATVTLNMDGFDTLVLEAIAGNENNGGERPNIDGEGLYVVWPNGNEDKLIPARDELGGDRNSQNDRYDSKYGGWRNITTNIPSQYRKDNVDVILKQTLIDSGVESGIPTNTHPNGFDAFGVSKIGVQGTALQTSGSGTANLRFNFEWDDNPDDWDTALGQVIIGDVGGSIVFSRDTDDEDGDENKTLFGVSSGLYRASIRGNKGGFEVKNNNQRLCFKDGDGDDCNADLRITNTTGGITAKFTRDGDLRITGSGVGNVEFNFEYDDDPDNAGLAIESISFSNSEGLIFIQTPGQREGSQQESLEVTAGATFPVTIQDNSGGYEVVNNGKKIKFFDRDGKDTNASLEVTVEAQNTIENDSYWSDRGNALAAWVNPEVCTLPQRVQKVTYRVNIAQADEYNFEFACDDVAQLFFEEETVPALDIEGGIFRGGALSTPYNYQRNLSAGIIEFTVRCTNSAAGYIDGDGDPFGGAYEWALNPGGWYIRICRGGQCIGGDNTAPWVPSFPWHTWNNFMNTYAVWPSATDPNPGVYQSASWTFNVPSTGNYVLRTNADDTATFVVDGVTIGTTTGFQGPVIEYPLNNFSSGPHTLTVSALNVTNANGTNINWEQNPAGVAWTIEGINGNVDATFNNQGGLVVTGDGTGVIQFEFEWDDNPGDAGQALGTFSIPGIGLSFTQTSGVEEGSDSASATAKAGTYNANINNNTGGFDVTNSGKRINFRDRDGDDNNAILRIVGSSQQNVIIASSLDTSSGNGNIIWTTRDATGYEYYEVT
Physico‐chemical
properties
protein length:1011 AA
molecular weight: 109750,16110 Da
isoelectric point:4,23186
aromaticity:0,10584
hydropathy:-0,46686

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009133763.1
1 1011
Domain Start End Length (AA) Confidence
N-terminal 1 696 696 0,7260
Central domain 697 1000 305 0,3790
C-terminal 1001 1011 10 0,1049
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-696
Central
697-1000
C-terminal
1001-1011

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage ACG-2014g
[NCBI] 		1493512 Uroviricota > Caudoviricetes > Pantevenvirales > Macariavirus > Macariavirus tuscon14g
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009133763.1 [NCBI]
Genbank nucleotide accession
NC_026924 [NCBI]
CDS location
range 166108 -> 169143
strand +
CDS
ATGGCATTTTATTATCCTGAAGGAATATTTGGTCCTGTTTGTGATGTCATCAGACCAGAGGCAGACATTGCCCGTGACGGAAGAGGGGCATTAGCAGAACCAGATGACCGTGAAATCACGCTCGAACTTGATGGTGATGATGATGATTATGGTCCTACTAATCCTGTTATCATTAAAAGAATTAGATGTAAGAAGCGTTCTGATGGAACATATTATGATTGTATATACGAATGGTTAAATGATACAATCTTTGATGATTGGGAAAGATGTATTGCTCCTCAGGCAGAATGTTATGATTGGGGAGATAGGTCTGTAAGAGATTTAAGACTAGATGAAGACTTCTTTATTCCTGACATAGGACCCGATGCATGTTTTCCTTTTGACCCTGATATTAATATCAGAAACAATGCATTCTTTTCTGCTAATGGCGAAAGAGTATTGATGGCAGCAAGGGAACGGTCTTCACCAGTCACCTTTCCTGTATCATCGAGAGCAAGATTTTTAATTAGTAATAATAATGTACAGGCATCATTTGCAGGAACTCTGAGTTACCTTATAACAGATCCTAGTATCAATTTACGAGTCAATGGAACCTCTACAAGAAACTGGGGCAATGGTTCTGGTGCATTTGGTGGTTTTGTTTTCCCTAATGGTGGTGGTGATAAGTATCTTGCTTTTGGCAATCCAGGTACGACTCCATTTTCAAATGCACAAGTCAATCGTCTAGCAACAGTCACTCTTAACATGGATGGATTTGATACTCTGGTTTTAGAAGCTATTGCAGGTAACGAGAATAATGGTGGTGAAAGACCAAACATTGATGGGGAAGGACTTTATGTAGTCTGGCCTAACGGAAATGAGGATAAACTTATACCCGCTAGAGATGAACTTGGTGGTGATAGAAATTCTCAGAACGATAGGTATGATAGTAAGTATGGTGGGTGGAGAAATATAACTACCAATATTCCCAGTCAATATAGAAAAGATAATGTAGACGTTATTCTTAAACAGACTCTAATTGATTCTGGAGTTGAGAGTGGTATTCCTACTAACACACACCCAAATGGATTTGATGCTTTTGGCGTTTCTAAAATTGGTGTGCAAGGAACTGCATTGCAAACTTCTGGAAGTGGTACAGCAAACTTAAGATTTAATTTTGAATGGGATGATAATCCAGATGACTGGGATACTGCTTTAGGACAGGTAATTATTGGAGATGTTGGTGGTAGTATTGTTTTCTCTAGAGATACAGATGATGAAGATGGTGACGAAAATAAGACTCTGTTTGGTGTAAGTTCAGGACTTTACCGAGCCAGTATTCGTGGGAATAAAGGTGGGTTTGAAGTAAAAAATAACAATCAAAGACTATGTTTTAAGGATGGTGATGGGGACGATTGTAATGCTGACTTAAGAATTACAAATACTACAGGTGGTATTACTGCAAAGTTTACTCGTGATGGGGATTTAAGAATAACAGGTTCTGGTGTTGGTAATGTAGAATTTAATTTTGAGTATGATGACGACCCCGATAACGCAGGACTTGCCATTGAAAGTATTTCATTTTCAAATAGTGAGGGTCTCATATTCATTCAGACTCCAGGGCAACGGGAAGGTTCTCAACAAGAATCTTTAGAGGTAACTGCAGGAGCAACATTCCCAGTTACAATTCAAGATAATAGTGGTGGGTATGAAGTTGTAAATAATGGCAAAAAAATTAAATTTTTTGATAGGGACGGGAAAGATACCAACGCTTCTTTAGAAGTTACTGTAGAAGCACAAAACACTATAGAAAATGATTCATATTGGAGTGACCGTGGGAATGCTCTTGCCGCTTGGGTCAATCCAGAAGTATGCACATTGCCCCAAAGGGTTCAGAAGGTTACTTACCGAGTTAATATTGCACAAGCAGATGAATATAATTTTGAGTTTGCATGTGATGATGTTGCACAACTTTTCTTTGAAGAAGAAACTGTGCCTGCATTGGATATTGAGGGTGGTATTTTTAGAGGTGGAGCACTTAGCACACCATACAATTATCAAAGAAATTTATCTGCTGGAATAATAGAATTTACAGTAAGATGTACAAACAGTGCTGCTGGATATATTGATGGTGATGGAGACCCCTTTGGTGGAGCATATGAATGGGCTTTGAATCCTGGTGGATGGTATATTAGAATTTGTAGAGGTGGTCAATGTATTGGTGGTGACAATACTGCCCCATGGGTTCCTTCATTCCCTTGGCATACATGGAATAATTTTATGAATACCTATGCTGTATGGCCATCGGCAACAGACCCCAATCCAGGGGTATATCAAAGTGCATCATGGACATTTAATGTGCCTTCAACTGGAAATTATGTACTAAGAACAAACGCAGATGATACTGCAACATTCGTCGTAGACGGCGTAACTATTGGTACTACTACAGGATTCCAAGGACCTGTAATAGAATACCCATTAAACAATTTTAGTTCTGGTCCTCACACATTGACAGTAAGTGCTTTAAATGTTACTAATGCTAATGGAACGAATATTAATTGGGAACAGAATCCAGCAGGTGTTGCATGGACGATTGAGGGAATTAATGGTAATGTTGATGCAACATTCAATAACCAAGGTGGTTTAGTTGTTACAGGAGATGGTACTGGTGTAATACAATTTGAATTTGAATGGGATGATAATCCTGGTGATGCTGGACAAGCATTAGGTACATTCAGTATCCCTGGTATAGGATTATCATTCACTCAAACTTCAGGTGTGGAGGAAGGGAGTGATAGTGCTAGTGCTACGGCAAAGGCAGGAACATACAATGCAAACATCAATAATAATACTGGAGGATTTGATGTCACAAATAGTGGTAAAAGGATTAATTTCCGAGACCGAGATGGTGATGATAACAATGCAATACTTAGAATAGTTGGTTCAAGTCAACAGAATGTTATTATTGCTTCCTCACTTGACACATCTTCAGGAAATGGTAATATAATATGGACTACAAGAGATGCAACAGGATACGAATACTATGAAGTTACCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b069b47bd0c12274fe9fd0d0feb330025827971c96a59f6eaee2246d3e4f8be9
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3099
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Ecological redundancy of diverse viral populations within a natural community Gregory,A.C., LaButti,K., Copeland,A., Woyke,T. and Sullivan,M.B. 2015-03-20 — GenBank