Protein

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UniProt accession
X4YDU4 [UniProt]
Protein name
Hemolysin-type calcium binding protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MANKPTQPLFPLGLETSESSNIKGFNNSGTIEHSPGAVMTFPEDTEVTGLPSSVRYNPDSDEFEGYYENGGWLSLGGGGIRWETLPHAPSSNLLEGRGYLINNTTGTSTVVLPSPTRIGDSVTICDAYGKFATYPLTVSPSGNNLYGSTEDMAITTDNVSATFTWSGPEQGWVITSGVGLGQGRVYSREIFTQILASETSAVTLNTPPTIVDVYADGKRLAESKYSLDGNVITFSPSLPASTELQVIEYTPIQLGNGGGSGSSTITWVYNGGSAIGGETEITLDIVVDDVPAIDINGSRQYKNLGFTFDPLTSKITLAQELDAEDEVVVIINGTPNIYNQIDYTLREVARVTNVKDTEVVYFSVGAVLSGYKVIYDKVTQRSYFIPELPTGTTAVSLSSSAVLVHSAGSVDLGALAVSREEYVTLAGTFDSGAVINTKNELLTHTDGKYRWDGTLPKTVDAGSTPETSGGIGIGSWVGVGDASLRSDLNSTNGAGIVKTGNGNTVQETFDFIKNVQQTNLHPFVPSGNFGSGLPFDSSLQVFKYNDEYYSYKGPIVPGSIVPATPSVDSNWKKEPVSDYIENYGGGVHVADQTPAIMAAISAGVRRIIFPKGELRMSQCDIPEYTQGLTFEGQGANQAYTGTTVIKPLNDNQNCLFNSGVNQHGQDSIKFKNIQFDGEWRCNHAILHESGAGWYYEKLTGKNFNTWVIYDDQGLAVIRDVYTEATSSDLTKRATGGCIRIYSDSVMDTVNCYGGSVPLLLAAGGNRITNIWANGGYDVGAIRLMPKNDSTNHINTAMSNIYIGESTNTSATAIPVLHIQGNSIRRVSGVQISNAHFVHADLTLNTNMVMIRTDKVDGFVMSSFDVLGRGEYSSASSRTYNFLNATDSTGMAFSAGSVRGINNNPIVLSSGSRLAIDAVEFDGWSTNSDSGIENKAAIRSSGAGTRCCIGSSCAFNASQANAYAVYAGDEFSVDISILNLNYPSSNIISPANANYSYMYKRPGGKLTLVNTLTI
Physico‐chemical
properties
protein length:1013 AA
molecular weight: 108223,82240 Da
isoelectric point:4,76194
aromaticity:0,08983
hydropathy:-0,18539

Domains

Domains [InterPro]
DC_1946
ATT
1–682
DC_1946
G3DSA:3.30.2020.50
ATT
335–420
G3DSA:3.30.2020.50 G3DSA:2.10.10.80 IPR011050
IPR040775
RBD
416–481
IPR040775
X4YDU4
1 1013
Architecture
ATT
STR
ATT 1-682 | STR 683-845 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
X4YDU4
1 1013
Domain Start End Length (AA) Confidence
N-terminal 1 593 593 0,9962
Central domain 594 987 395 0,9898
C-terminal 988 1013 25 0,6780
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-593
Central
594-987
C-terminal
988-1013

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB-SalM-SJ3
[NCBI] 		1446492 Uroviricota > Caudoviricetes > Pantevenvirales > Cvivirinae > Kuttervirus
Host Salmonella
[NCBI] 		590 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0044423 virion component Cellular Component IEA:UniProtKB-KW (UniProt)
GO:0051701 biological process involved in interaction with host Biological Process IEA:UniProtKB-ARBA (UniProt)
GO:0019058 viral life cycle Biological Process IEA:UniProtKB-ARBA (UniProt)

Tertiary structure

PDB ID
e394588671e447c3a860e4b65f35dd689882549f757340501e26db2d1e4f95e6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7274
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50