Protein

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Genbank accession
QJA42962.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,84
Protein sequence
MANTKIILPSLSQSETLFGDAILNDPFPPFIGVEASFTEDPEEPVDPTYRVDLHASNFDGTSLISAGTDVEEGWALSDAGSANTVFVDDANAVGPAMKFDGASYLTSAEQPGVASALDVLTTGTYRITSYMSLGGGIGTPRGTFFSYVSASRNTNLEISGSSDAVNFRVRVNNSQWVVSQATESLVFPQGELIRVTMDVVDNVASLFVNDLQIAPSVPIPAFTEIDGRVTLGAAYRSSAFNFMEHWLHRVTID
Physico‐chemical
properties
protein length:253 AA
molecular weight: 27060,70670 Da
isoelectric point:4,22407
aromaticity:0,09486
hydropathy:0,03518

Domains

Domains [InterPro]
IPR013320
STR
75–242
IPR013320
IPR013320
STR
85–242
IPR013320
QJA42962.1
1 253
Architecture
STR
STR 75-242 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Phaeobacter phage MD18
[NCBI] 		2723761 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Phaeobacter inhibens DSM 17395
[NCBI] 		391619 Pseudomonadota > Alphaproteobacteria > Rhodobacterales > Roseobacteraceae > Phaeobacter > Phaeobacter inhibens

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QJA42962.1 [NCBI]
Genbank nucleotide accession
MT270409 [NCBI]
CDS location
range 13016 -> 13777
strand -
CDS
ATGGCGAACACAAAAATCATATTGCCGTCTCTGTCTCAGTCTGAGACCCTTTTCGGGGATGCCATTCTGAATGACCCCTTCCCCCCGTTTATTGGGGTGGAGGCGTCATTTACGGAGGACCCAGAAGAGCCTGTCGATCCGACTTACCGGGTCGACCTGCATGCGTCCAACTTTGATGGGACATCACTGATTTCTGCAGGGACGGATGTTGAGGAGGGATGGGCCCTCTCCGACGCAGGAAGTGCGAACACCGTATTCGTGGACGACGCTAACGCCGTCGGGCCCGCTATGAAGTTCGATGGGGCCTCGTACCTTACGTCTGCGGAACAGCCGGGGGTAGCCTCTGCTCTGGATGTTCTGACTACGGGAACGTACCGGATCACCTCGTACATGAGTCTTGGAGGAGGGATTGGGACCCCCCGAGGAACCTTCTTCTCGTATGTATCAGCCTCTCGGAACACCAATTTGGAGATTTCCGGATCGTCGGATGCGGTGAACTTCCGGGTACGTGTCAACAACTCACAGTGGGTGGTTTCGCAGGCAACAGAGTCGTTGGTATTCCCGCAGGGGGAACTCATCCGGGTGACTATGGATGTCGTAGACAATGTGGCTAGCCTGTTTGTGAACGACCTTCAGATTGCCCCGTCTGTTCCAATCCCTGCATTTACTGAAATTGATGGGCGGGTAACCCTTGGGGCCGCGTACCGATCTTCAGCTTTCAACTTCATGGAGCATTGGCTCCATAGGGTCACCATCGATTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
2a0c543adac84e52f9e6a1b04288511cbb07f92244565b6863231cc26cf5fa49
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7541
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Discovering the Molecular Determinants of Phaeobacter inhibens susceptibility to Phaeobacter phage MD18 Urtecho,G., Campbell,D.E., Hershey,D.M., Whitaker,R.J. and O'Toole,G.A. 2020 33148823 GenBank