Protein

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Genbank accession
YP_009275464.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,60
Protein sequence
MAKAGGTYPDILQGVSQKPAHRRRPGQTHEQINVLSDPVNGLVRRRGTRFAASQAVVTSAELRNMDVFDFMQEGKEYALLYRRDASTLGSESFAFLYNKTDETFIPLVYENSTWVNTLVSGGASSLAAIGSYVYIAGNTTSPSATSTNVWQEQTNIQRLAAWVRSGKYNTTYTVNLTRTDNTVLTVTFKTVTASYPGTLDTTDIPFYLPGGTEPDPAYQKHVNDRVNEYNSAVNEWIVTSAEQTRPEYIAEQLSDLLVDAGVASTYIKGGIVIEDDQFKDITVDDEGDGTTFYAAGQEITDATYAVKFHWHGKIIRVRPSGAGADESYYLRAELENGETSGYGSVDWYEAPGVECTIDNLVSQLYIYNGVGYIARNGAGLTSLAPGSGEHPAYGARVAGDGLTSPIPWFIDKPITMLSVFQDRLVIGAQNYVNASRSADYLNFWRGSAGTIEDSDPIEIFAHGSEGDVLRHATLYNGNLVIFGDRQQYGISGDSVFSPKSPLSKAFSANKDSVDAKAQTSGNYIFYAQYGSEGTSLHQMRVGALNGQQTVTDEMSNELDSWLSGTPLQITPLTAPNLVMFRTRGHPQDFYLYRYEDNKNNGQRIVDAWSKFQYHPALGEIIGVSSYKKNGLVFTARGPLVVCDVFDPKGEPDSHACLDSWASFGTPTGVQTASASIAVNSTSPYFLLGCPYAQASDFLSQFDDLNAGALEYGVVSEALVIPTNPFPRDQNGQAVLDGRMSLNKVTVDVENTAGMLAAVTTRNNNMTTTDFEGRILGDSDNLIARQPVYRGQLNISVGREVSECTYEIRSKDWLPLRVTGLSWTGQTFNNVRRVS
Physico‐chemical
properties
protein length:834 AA
molecular weight: 91235,03710 Da
isoelectric point:4,90449
aromaticity:0,10312
hydropathy:-0,33213

Domains

Domains [InterPro]
IPR058003
TTP
1–628
IPR058003 IPR058003
DC_0058
STR
1–834
DC_0058
YP_009275464.1
1 834
Architecture
STR
STR 1-834
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009275464.1
1 834
Domain Start End Length (AA) Confidence
N-terminal 1 187 187 0,8735
Central domain 188 390 204 0,3162
C-terminal 391 834 443 0,3105
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-187
Central
188-390
C-terminal
391-834

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage f20-Xaj
[NCBI] 		1784979 Uroviricota > Caudoviricetes > Autographivirales > Gujervirinae > Pradovirus
Host Xanthomonas arboricola pv. juglandis
[NCBI] 		195709 Pseudomonadota > Gammaproteobacteria > Lysobacterales > Lysobacteraceae > Xanthomonas > Xanthomonas arboricola

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009275464.1 [NCBI]
Genbank nucleotide accession
NC_030928.1 [NCBI]
CDS location
range 23172 -> 25676
strand -
CDS
ATGGCAAAGGCAGGCGGAACCTATCCCGACATCCTTCAGGGTGTCAGTCAGAAACCGGCGCATCGTCGTCGGCCGGGCCAGACGCACGAGCAGATCAACGTGCTGTCCGATCCGGTGAACGGCCTAGTGCGCCGTCGTGGTACGCGGTTCGCTGCTTCCCAAGCCGTTGTCACCTCGGCCGAGCTGCGCAACATGGACGTGTTCGACTTCATGCAGGAGGGCAAGGAGTACGCGCTGCTGTACCGGCGCGACGCTTCGACCCTGGGCAGCGAGTCCTTCGCATTCCTCTACAACAAGACGGACGAGACGTTCATTCCGCTGGTGTACGAGAACAGCACGTGGGTCAACACGCTGGTCAGCGGCGGCGCATCCTCGCTCGCAGCCATCGGAAGCTACGTCTACATCGCAGGCAACACCACGAGCCCCTCGGCCACCAGCACGAACGTGTGGCAGGAGCAGACGAATATCCAACGCCTCGCGGCGTGGGTACGCAGCGGCAAGTACAACACCACGTACACGGTGAACCTGACGCGGACGGACAACACTGTGCTGACGGTGACGTTCAAGACGGTGACCGCATCGTATCCCGGAACGCTCGACACCACTGACATCCCGTTCTACCTGCCCGGTGGGACGGAACCGGACCCGGCGTACCAGAAGCATGTCAACGACCGAGTGAACGAGTACAACTCCGCAGTCAACGAGTGGATCGTGACGAGCGCCGAGCAGACGCGCCCGGAGTACATCGCCGAGCAGCTGTCGGATTTGCTGGTAGATGCAGGCGTAGCGTCGACGTACATCAAGGGTGGCATCGTGATTGAAGACGACCAGTTCAAGGACATTACGGTTGACGACGAGGGCGACGGCACGACCTTCTACGCCGCAGGGCAGGAGATTACCGACGCGACCTACGCCGTGAAGTTCCATTGGCACGGCAAGATCATCCGAGTGCGCCCGAGCGGTGCAGGTGCGGACGAGTCGTACTACCTGCGTGCTGAGTTGGAGAACGGAGAGACTTCGGGCTACGGCTCGGTGGACTGGTACGAAGCGCCCGGCGTGGAGTGCACCATCGACAACCTCGTGTCCCAGCTCTACATCTACAACGGTGTGGGCTACATCGCGCGCAACGGCGCGGGCCTCACGTCTCTGGCTCCAGGCAGCGGCGAGCATCCGGCCTACGGTGCGCGGGTGGCAGGCGATGGTCTGACCTCGCCGATCCCGTGGTTCATCGACAAGCCGATCACCATGCTGTCCGTCTTCCAAGACCGGCTGGTCATTGGCGCGCAGAACTACGTCAACGCCTCGCGCTCGGCGGACTACCTGAACTTCTGGCGCGGCTCGGCCGGCACCATCGAAGACAGCGACCCCATCGAAATCTTCGCGCACGGTAGCGAGGGCGATGTGCTGCGGCACGCGACGCTCTACAACGGCAACCTCGTGATCTTCGGTGACCGTCAGCAGTACGGCATCAGCGGCGACTCGGTGTTCAGTCCAAAGAGCCCGCTGAGTAAGGCGTTCAGCGCCAACAAGGATTCGGTGGATGCGAAGGCGCAGACCTCGGGCAACTACATCTTCTATGCGCAGTACGGCAGCGAAGGCACGAGCCTGCACCAGATGCGTGTGGGCGCGCTCAACGGGCAGCAGACGGTGACGGACGAAATGTCCAACGAGCTGGACTCGTGGCTGTCGGGCACTCCGTTGCAGATCACCCCGCTCACTGCGCCGAACCTCGTCATGTTCCGCACGCGAGGGCACCCGCAGGACTTCTACCTGTACCGGTACGAGGACAACAAGAACAACGGGCAGCGTATCGTGGATGCGTGGTCGAAGTTCCAGTACCACCCGGCGCTGGGCGAAATCATCGGCGTGAGCAGCTACAAGAAGAACGGCCTCGTGTTCACCGCACGCGGGCCGCTGGTGGTGTGCGACGTGTTCGACCCGAAGGGCGAGCCGGACTCGCATGCGTGCCTCGACAGCTGGGCGAGTTTTGGTACACCTACGGGCGTACAGACCGCGAGCGCAAGCATCGCCGTCAATAGCACTAGCCCGTACTTCCTGCTGGGTTGTCCCTACGCACAGGCGTCTGACTTCCTTAGCCAGTTCGATGACCTCAACGCTGGCGCGCTGGAATACGGCGTGGTGTCCGAGGCTCTGGTGATCCCGACCAATCCGTTCCCTCGGGATCAGAATGGTCAGGCCGTACTCGACGGACGCATGTCACTCAACAAGGTGACGGTGGACGTAGAGAACACTGCGGGCATGCTCGCTGCGGTGACAACCCGCAACAACAACATGACCACCACGGACTTCGAGGGCCGCATCCTCGGCGACTCCGACAACCTGATCGCGCGGCAACCGGTATACCGGGGGCAGCTCAACATCAGCGTCGGGCGCGAAGTGAGCGAGTGCACCTACGAGATTCGCAGCAAGGATTGGCTCCCGCTCCGGGTGACCGGCCTGAGCTGGACGGGTCAGACCTTCAACAACGTACGACGCGTGTCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
79f5190327f80fb88a3655a0dc6f411e11fc29a95219baa505111e05c853cbb1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8430
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50