Protein

View in Explore
Genbank accession
YP_010112196.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,80
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MIARIKGLKISQASERTVVTGLEMIPFQDGERNGKIRMIEFKDMTMYIFDPTIVDGKVSQEDYDALKQAIEEGKLIYTINSNRNGLDLATEVAIVGGTIYIESPDFIKEEGTDNISQVVFDTITVDGSLNYSKEQYTTTVIKTTGDGTKVLTDNGQYVYIGNLALTNIKFKDGTNTSTYDLVTNGITFRQNSTPCVSWNTVKSGNNIYMDIRIANATASMDGLMSKEDYVELNTTIPGQIEDLKEADSNINNRIDDLDDKIDKEIADREAEIDRIENKFDGVTDKLEDALQKEIEDRKAGDTTITNSLNAFISTKGQPSGLAELDSTGKVPAAQLPSYVDDVLEFSTKAQFPLTGETGKIYVAKDTNLTYRWTGTQYLEISLSLALGETPSTAYSGDKGKANRDALNSMPTKITSYLTPTTSTGELVKINYKYAAKDGLNYGPLQDDNIDIPSATTTNAGAMSAIDKGRLDSLYNEFGSIQNPGDKLDSLPNNLVTGMDVTSRNATSVTINYKQSDLSAASNSYANPITKSLTIPAATQSAAGVMTATDKLNLDVNIPNRITNLDNRVTTEVDRLEELIESSSSEITNDLNVEIQARKDGDNLLQTNINNLLSTMNTELAKKVGKVTVAGSGNAVTTASISGDTLTLTKGATYNNYVHPAGSAPSKASGFYKFSTDSTSHVASVTAVTKADITALGIPALNTNTTYTFANGSAGNFTVTPSGGSALTVSVGKPANAGNADTVGGISPSDFVKKAGDTMTGNLNFDNNTGIITTITADGSHIVKIGSAITGGWARGYNFFNNNSGAALAAIGCLGGGQTLSYAYIGNTYENTWQRWNSSGSVITVPLTTAAITSSGVVKTTLEMIAKYLRFEKDGANVGYIGAGSTANNDIYILSQNDNSIHFCVSGYSTSAGMTVHTNSNVSIGGDAATEKLNVAGNITSTGKVSAANGFFKESDARLKSDIKPLDYTLDLICSIPTVSFIMNDLKQIGTIALDLEELGFECIVTESDALKSEVKNPEQFESFTKDGEEYVKVKKVEYEMLGVLAIEGVKMLKDEIEKLKAEIETLKNKQHE
Physico‐chemical
properties
protein length:1072 AA
molecular weight: 114936,75270 Da
isoelectric point:4,70618
aromaticity:0,06623
hydropathy:-0,30401

Domains

Domains [InterPro]
DC_2018
STR
1–306
DC_2018 DC_0971
Coil
Unmapped
240–292
Coil IPR030392 Coil
DC_1870
STR
260–531
DC_1870 IPR030392
YP_010112196.1
1 1072
Architecture
STR
RBD
STR 1-531 | RBD 818-1071 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010112196.1
1 1072
Domain Start End Length (AA) Confidence
N-terminal 1 620 620 0,9272
Central domain 621 819 200 0,5468
C-terminal 820 1072 252 0,8927
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-620
Central
621-819
C-terminal
820-1072

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured phage cr53_1
[NCBI] 		2772080 Uroviricota > Caudoviricetes > Crassvirales > Loutivirinae > Blohavirus
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010112196.1 [NCBI]
Genbank nucleotide accession
NC_055889.1 [NCBI]
CDS location
range 25185 -> 28403
strand +
CDS
ATGATAGCAAGAATTAAAGGTTTAAAGATTAGTCAGGCTTCAGAACGTACTGTTGTCACAGGATAGGAAATGATTCCATTCCAAGATGGTGAAAGAAATGGTAAGATCCGAATGATAGAGTTTAAAGATATGACTATGTATATCTTTGATCCTACTATCGTTGATGGTAAAGTAAGTCAAGAAGATTATGACGCATTAAAGCAAGCTATAGAAGAAGGCAAGCTTATCTATACCATTAACTCTAATAGAAATGGATTAGACTTGGCAACTGAAGTAGCTATAGTTGGTGGTACTATATATATTGAATCTCCTGATTTTATTAAAGAAGAAGGCACAGATAATATATCTCAAGTAGTGTTTGATACTATTACTGTAGATGGTTCATTAAACTATAGTAAAGAACAATATACTACTACAGTTATTAAGACTACTGGAGATGGTACTAAAGTACTTACAGATAATGGTCAGTATGTATATATAGGTAATTTAGCATTAACTAATATTAAGTTTAAAGATGGTACTAATACATCTACTTATGATTTAGTAACTAACGGCATTACCTTTAGGCAGAATAGTACTCCTTGTGTATCTTGGAATACTGTTAAGAGTGGTAACAATATCTATATGGATATACGTATAGCTAATGCTACTGCATCTATGGATGGTCTAATGAGTAAGGAAGACTATGTAGAACTTAATACTACTATTCCTGGGCAGATTGAAGATCTAAAGGAAGCTGACTCCAATATAAATAATAGAATAGACGATCTTGATGATAAGATTGATAAGGAGATTGCTGATAGAGAAGCAGAGATAGACCGTATAGAGAATAAGTTTGATGGAGTTACCGATAAACTAGAGGACGCTCTACAGAAAGAGATTGAAGATAGAAAAGCAGGCGACACTACTATTACTAATAGTTTAAATGCATTCATTAGTACTAAAGGTCAACCTAGTGGTTTAGCTGAATTAGACTCAACTGGTAAAGTTCCTGCAGCTCAATTACCGTCTTATGTAGATGATGTATTAGAGTTCTCTACTAAAGCTCAATTCCCTTAGACAGGTGAAACTGGTAAGATATATGTAGCTAAAGATACTAACTTAACATATAGATGGACTGGTACTCAATACTTAGAGATTAGTTAGAGTTTGGCATTAGGTGAAACTCCTAGTACGGCGTATTCTGGAGATAAAGGTAAAGCTAATAGAGATGCTTTAAATAGTATGCCTACTAAGATTACTTCATATCTTACTCCTACTACTAGTACTGGTGAATTAGTTAAGATTAACTATAAGTATGCAGCTAAAGATGGTTTAAATTATGGTCCATTACAGGACGATAATATCGATATACCATCAGCTACAACCACTAATGCAGGTGCTATGTCTGCAATAGATAAAGGTAGATTAGATAGCTTATATAATGAATTTGGTAGTATACAGAATCCTGGTGATAAGCTTGATTCACTACCTAATAACCTAGTTACTGGTATGGATGTAACGTCTAGAAATGCAACTAGTGTAACTATTAACTATAAGCAATCTGATTTATCTGCAGCTAGTAATTCATATGCGAATCCTATTACTAAGTCATAGACTATACCTGCTGCTACACAATCTGCAGCTGGTGTAATGACTGCTACTGATAAATAGAACTTAGACGTTAATATACCTAATAGAATTACTAATCTAGATAATAGAGTAACTACTGAAGTAGATAGATTAGAAGAGCTTATCGAGAGCAGTTCATCCGAGATTACTAACGATTTGAATGTAGAGATTCAAGCTAGAAAGGATGGTGATAATTAGTTACAGACTAACATCAATAATCTGTAGTCTACTATGAATACAGAATTAGCTAAGAAGGTTGGTAAAGTAACCGTAGCTGGTTCTGGTAATGCTGTTACTACTGCATCTATTAGTGGCGATACTCTTACTCTAACTAAAGGAGCTACATATAATAACTATGTACATCCTGCTGGTTCTGCACCTAGTAAAGCATCTGGATTCTATAAGTTCTCTACTGATTCTACTAGTCATGTAGCTAGTGTTACTGCTGTAACTAAAGCTGATATAACTGCTTTAGGTATACCTGCATAGAATACTAATACTACATATACATTTGCTAATGGTTCTGCTGGTAATTTTACAGTAACTCCATCTGGAGGTAGTGCATAGACTGTAAGCGTTGGTAAACCAGCTAATGCAGGTAATGCTGACACAGTTGGTGGTATCAGTCCATCTGATTTCGTAAAGAAAGCTGGTGATACTATGACTGGTAACTTGAATTTTGATAACAATACCGGAATCATTACAACTATCACTGCAGATGGTAGTCATATTGTTAAAATAGGCTCTGCAATTACAGGAGGATGGGCAAGAGGGTACAACTTCTTCAATAATAACTCAGGAGCAGCCTTAGCTGCAATAGGGTGTCTTGGAGGAGGACAGACACTCAGTTATGCTTATATTGGCAATACCTATGAAAATACTTGGCAAAGATGGAATTCGTCAGGGTCTGTTATAACTGTGCCATTAACTACAGCTGCTATTACATCTTCAGGGGTCGTTAAAACCACTTAGGAAATGATTGCTAAATACCTCCGTTTTGAAAAAGATGGTGCTAATGTAGGTTATATAGGGGCTGGTTCTACTGCTAACAACGATATATACATATAGTCGCAAAATGATAATTCTATACACTTTTGTGTATCTGGTTATAGTACATCTGCAGGTATGACTGTACACACAAATAGTAATGTATCCATAGGAGGTGATGCAGCTACAGAAAAACTCAACGTTGCAGGTAATATTACATCTACTGGCAAAGTATCCGCAGCTAATGGTTTCTTCAAAGAATCTGATGCCCGTTTAAAATCAGATATCAAACCTTTAGATTATACTTTAGACTAGATATGTTCTATACCAACTGTATCATTTATAATGAATGATTAGAAGCAAATAGGTACTATAGCATAGGATTTAGAGGAATTAGGTTTTGAATGTATAGTAACTGAAAGTGATGCTCTTAAATCTGAAGTAAAGAACCCTGAACAGTTTGAATCATTCACTAAAGATGGTGAAGAGTATGTTAAGGTCAAGAAGGTAGAGTATGAAATGTTAGGTGTATTAGCTATTGAAGGAGTTAAGATGCTTAAGGATGAGATTGAAAAGCTTAAAGCTGAAATAGAAACTTTAAAGAATAAGCAACATGAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
be0286cd7e065764a7bc4f47d19aeb5860f25083bad1a9afd2c61d4ac375c42b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5492
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Taxonomic proposal: Crassvirales, a new order of highly abundant and diverse bacterial viruses Shkoporov,A.N., Stockdale,S.R., Guerin,E., Ross,R.P. and Hill,C. 2023-03-24 — GenBank