Protein

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Genbank accession
AVH85169.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MISSWILGVLSNMHVVVSNPFSWTNTVTGTGDEGQLSMTVHGGKIWLCDNATVKSYNISDGSLVTTIDLNAYLGVTNNVSDIYAVDSNGVLWLLSRSSYHTTQPAIIRIDTATGTIKDGLFGGTYRMTNDFLNICGDGTTNYVWGVHENRDSGTVRKLAKIDITSGAIVNEYTLAKLYGSMVYDSVNLRLWGTSSNGVSYSMDLYTLDSGTYTPTLSTTITPYGDLSAGQIIRPTSGDELVIVAQNPNNNLYNITRYNALTGAVILNVDLSDSRLDYNTQYQAYVNGPVKYNPVTDEIYVTVSRQATSADPNLHELWAFHRSDLSFSRIVTPYNVTDTVWDYTIYGGNTYVLYDSTNKLVKLANG
Physico‐chemical
properties
protein length:365 AA
molecular weight: 40074,16750 Da
isoelectric point:4,84009
aromaticity:0,10411
hydropathy:-0,13452

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AVH85169.1
1 365
Domain Start End Length (AA) Confidence
N-terminal 1 17 17 0,0749
Central domain 18 256 240 0,8953
C-terminal 257 365 108 0,3580
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-17
Central
18-256
C-terminal
257-365

Taxonomy

  Name Taxonomy ID Lineage
Phage Ralstonia phage RsoM2USA
[NCBI] 		2070027 No lineage information
Host Ralstonia solanacearum
[NCBI] 		305 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AVH85169.1 [NCBI]
Genbank nucleotide accession
MG752970 [NCBI]
CDS location
range 155412 -> 156509
strand -
CDS
ATGATTAGTAGCTGGATACTCGGTGTATTATCTAATATGCATGTTGTAGTTTCTAATCCATTCTCATGGACGAACACCGTGACTGGTACTGGAGACGAGGGTCAACTATCAATGACAGTTCATGGTGGGAAAATTTGGCTCTGTGACAACGCGACTGTAAAATCGTACAACATTTCTGATGGTTCTCTTGTTACAACGATAGATCTAAATGCATACCTAGGAGTGACCAATAACGTCAGTGACATCTATGCTGTAGATTCTAATGGCGTTTTGTGGTTGCTATCTCGCAGCAGCTATCATACCACTCAACCAGCCATCATTCGTATTGACACAGCTACCGGAACTATCAAAGATGGATTGTTCGGAGGCACATATAGAATGACAAATGATTTCCTCAACATTTGTGGAGATGGAACGACAAACTATGTCTGGGGAGTTCATGAAAACAGAGACAGTGGAACAGTCAGAAAATTAGCCAAAATAGACATAACTAGTGGGGCTATAGTAAATGAATATACTTTGGCAAAGTTGTATGGTTCTATGGTTTACGATAGCGTTAACTTACGCTTATGGGGAACGTCTAGCAATGGCGTTTCCTACAGCATGGATCTGTATACGCTGGATTCTGGCACATACACGCCAACTCTATCTACTACGATAACTCCATACGGTGATTTAAGCGCCGGCCAGATTATTAGACCAACATCTGGTGACGAACTCGTAATAGTGGCGCAAAATCCTAACAATAATTTGTACAACATCACCCGTTATAATGCGCTAACGGGTGCGGTAATTCTTAATGTTGATTTGAGTGATTCCAGACTGGATTACAATACGCAATATCAAGCCTATGTAAACGGTCCTGTTAAATACAATCCAGTTACTGACGAGATTTACGTTACAGTGAGCCGACAGGCCACCTCTGCAGACCCAAATCTGCATGAGCTATGGGCATTCCATAGATCTGATTTGAGCTTTAGTAGAATTGTTACACCTTACAATGTTACAGATACGGTATGGGATTATACGATTTACGGTGGTAATACGTACGTTCTGTATGATTCAACAAATAAGTTAGTAAAACTTGCCAATGGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
97a340a8c1eb2501d6507f926ba6be8a66926a486917cb4bb6a5a6b58e3b61d5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7652
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome of RsoM2USA, the largest bacteriophage infecting plant pathogenic bacterium Ralstonia solanacearum Ahmad,A.A., Addy,H.S. and Huang,Q. 2021-09-27 — GenBank