Protein

View in Explore
Genbank accession
YP_010113915.1 [GenBank]
Protein name
tail length tape measure protein
RBP type
TF
Evidence RBPdetect
Probability 0,77
Protein sequence
MADKMIRGVEIDVTQKGVTKTTTSIKNLSQALEDAAAGAELTTDSLKSMSKEMQKVQQYADAMAGSFDKIGNSKGLKMLDRSIKEVASEIRFLTQEFQQFSSNFVVGMNNITKFADKMENNVVRAIEDVGDSMNAVTRNTRGYGQAADDAAKRAGKFTRAVGDTSGAARGATRDFAALARIAGPIPMLYGQIMSNVFALQQAFTYLKAGDQVNTMNKLGIAMTAITGTPTQLLAQSLQDATGSAISFEEAMSKATKATSLGASAGDLEKLGKVAQRASAAGFTSMSDALERVVNGVYKLDAASLSGAGIALDLNSAYKKYADQLNATGAGLNYNSQNLSKVQKQQALLNAVVEQSNTAFGKLDAALASSAWDKFGANIASSSSKLASLLASRLTPIVDVLNRLLEVGNKVKDLGDNLKLIREGLKTTDAESAGFVSTFSTVIEQEKKLIEEYKKAELAKAAASKELTKTINDADMNGLASRVAQFAQAPAMTALTTMLRDDTTSKTIKGWASATDDLHKAQSNLDSYNDAMKEVSDTLKMMREMSAGTGIESAFQSSFNVVDGVLQETVQIKEGFKGALQSVDELRAYSKEGKSNISDAMGNLSDTSKAQASLSQVQATIKALKTGADAFGTSWENIAASIGIAAGELNKLKAQEQILEEALEVYDAKGENALALARERKALADSIQGQAGAATKVAALNAKQQAQEAASEIKLLYKQLETVDKGSGAETRIKKRINELKVQEINNQISAMTKETVKQAKTERTILDLTQKIALVNNHMLSGYEYQVAMKKEELRINEQNMLQYKGKADKQNEYNQALLNEAQIKRDIAFMEKSEMVKQAENSIDFGRALFNTDSTKTSQDNLLRDIADFNERLNAELASSEATRTAKDQDKILKLKQDIAVAETKLVELENERQRMYANATTGLLGGTGQSTQGMGEDAKQQQDYVNNQQGYAEALSNLQAINSEATAVGTNLGNVMNAVMLYADGALDATSTAAAGMQLLSSVFNMSAKQQTSAIDMAIKAEQQRDGKSEESKAKIKKLEAEKVKIQQESAKKQILIQTATAVMQAANAVPYPWSIPLMIAAAASGAMAYAQASNPVNPSMDVGGGETGYLKLGERENRFDVSQSGNAGELAYTRGEKGIGSAQNFIPRAEGGTTLPGVGYIYGEHGVEIATSGVPGRVTSNDNIGSGGSGGNTTVVHINTIDAASFAEFASRNKETFRDAVEWSLNEEGATLVR
Physico‐chemical
properties
protein length:1237 AA
molecular weight: 132246,25690 Da
isoelectric point:5,55473
aromaticity:0,05093
hydropathy:-0,36160

Domains

Domains [InterPro]
IPR056207
TAS
1–80
IPR056207 DC_0073 IPR056208
Coil
Unmapped
76–96
Coil Coil Coil Coil Coil Coil Coil
YP_010113915.1
1 1237
Architecture
TAS
STR
TAS
TAS 1-80 | STR 82-1203 | TAS 1205-1236 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Providencia phage PSTCR5
[NCBI] 		2783547 Uroviricota > Caudoviricetes > Demerecviridae > Priunavirus PSTCR5 >
Host Providencia stuartii
[NCBI] 		588 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010113915.1 [NCBI]
Genbank nucleotide accession
NC_055910 [NCBI]
CDS location
range 31050 -> 34763
strand -
CDS
ATGGCAGATAAAATGATTAGGGGAGTTGAAATAGACGTAACCCAGAAAGGTGTTACGAAAACTACAACCTCCATTAAAAACCTATCTCAAGCCTTAGAAGACGCTGCTGCTGGAGCTGAACTAACCACTGACTCCCTGAAGAGTATGAGTAAGGAGATGCAAAAGGTTCAGCAATACGCAGACGCTATGGCAGGTAGCTTCGATAAGATAGGTAATAGTAAGGGTCTTAAGATGCTTGATAGAAGCATCAAGGAAGTAGCGTCTGAAATCCGATTCCTTACTCAAGAGTTCCAACAATTTAGCTCTAACTTCGTAGTTGGTATGAATAATATTACTAAGTTTGCTGATAAAATGGAGAACAATGTTGTTAGGGCGATCGAGGATGTAGGTGACTCTATGAACGCAGTTACCAGAAATACTCGTGGGTACGGTCAGGCAGCAGATGACGCAGCTAAACGAGCGGGTAAGTTCACTAGAGCTGTAGGGGATACCTCCGGTGCGGCTAGGGGGGCAACCCGTGACTTCGCAGCGTTAGCGCGTATTGCAGGCCCAATCCCAATGCTTTATGGGCAAATAATGTCCAACGTTTTCGCACTGCAACAAGCGTTTACCTATCTTAAAGCAGGGGATCAAGTTAACACTATGAACAAACTTGGTATAGCTATGACGGCTATAACAGGTACCCCCACTCAGTTACTTGCTCAAAGTCTTCAGGATGCAACAGGTAGTGCTATTAGTTTTGAGGAAGCTATGTCTAAAGCTACCAAAGCTACAAGCCTAGGCGCATCAGCAGGGGATTTAGAAAAACTTGGTAAGGTAGCACAGCGTGCTTCAGCAGCTGGGTTTACCTCTATGTCTGATGCCCTGGAAAGAGTAGTGAACGGGGTTTACAAGCTAGACGCCGCATCTCTTAGTGGTGCTGGTATAGCGCTAGACTTAAACAGTGCGTATAAGAAATACGCTGATCAATTAAATGCCACAGGGGCAGGGCTAAACTATAATTCTCAAAATTTATCAAAAGTTCAAAAACAACAAGCATTACTAAATGCAGTTGTGGAGCAGTCTAATACAGCATTCGGTAAACTAGATGCTGCTTTAGCCTCTTCGGCTTGGGATAAGTTCGGTGCAAATATTGCTTCTAGCTCGTCAAAACTAGCCTCACTGCTGGCTAGCAGATTAACTCCTATCGTAGACGTACTGAACAGACTGCTCGAAGTAGGAAACAAGGTTAAAGATCTAGGGGATAATCTAAAGCTTATTAGAGAGGGGCTGAAGACAACCGATGCTGAAAGCGCTGGTTTCGTATCTACTTTTAGCACTGTAATAGAGCAAGAGAAGAAGCTAATAGAGGAGTACAAGAAAGCAGAGCTGGCTAAGGCCGCTGCCAGCAAAGAATTGACTAAAACAATTAATGACGCTGATATGAACGGTCTGGCTTCACGTGTTGCTCAGTTTGCACAAGCACCTGCTATGACTGCCCTAACTACTATGCTTAGGGATGATACTACTAGTAAAACTATCAAGGGTTGGGCATCTGCCACAGATGACTTACATAAGGCGCAGTCAAACTTAGACTCTTATAATGATGCTATGAAAGAAGTATCAGATACCCTTAAAATGATGCGAGAGATGTCCGCAGGAACAGGGATAGAATCAGCATTCCAATCCTCCTTCAACGTGGTAGATGGAGTACTACAGGAAACTGTACAGATTAAAGAAGGGTTTAAGGGGGCGCTTCAATCCGTAGATGAACTGAGGGCGTACTCTAAGGAAGGCAAATCTAATATCTCCGATGCAATGGGTAACTTATCTGACACCTCCAAAGCACAAGCTAGTCTGTCTCAAGTTCAGGCTACTATTAAGGCTCTTAAAACGGGGGCGGATGCGTTTGGTACCTCGTGGGAGAATATAGCAGCATCAATAGGTATAGCTGCTGGAGAGTTGAATAAGCTTAAAGCACAGGAGCAAATATTAGAGGAAGCACTTGAAGTATACGATGCTAAAGGAGAGAATGCACTAGCTCTAGCTAGGGAGCGTAAGGCTTTAGCCGACTCTATTCAGGGGCAAGCAGGAGCAGCAACTAAGGTAGCGGCTCTAAATGCTAAGCAACAAGCTCAAGAAGCAGCCTCAGAAATAAAACTACTGTACAAACAACTAGAAACCGTGGACAAAGGCTCCGGTGCAGAAACTAGGATTAAAAAGCGAATTAATGAGTTAAAGGTTCAGGAAATTAATAACCAGATCTCTGCAATGACTAAGGAGACAGTTAAGCAGGCTAAAACAGAGAGGACAATTCTAGACCTTACCCAAAAAATCGCCCTAGTTAATAATCATATGCTATCCGGCTATGAGTACCAAGTTGCCATGAAGAAGGAAGAGCTGCGTATTAATGAGCAGAACATGCTGCAATACAAGGGTAAAGCCGATAAGCAAAATGAGTACAACCAAGCTCTCTTAAATGAAGCGCAGATCAAACGTGACATTGCATTCATGGAAAAGTCGGAGATGGTTAAGCAGGCAGAGAACTCTATCGACTTTGGTCGTGCGTTATTCAATACTGACTCTACTAAGACTTCTCAGGACAATCTATTACGTGATATTGCGGACTTCAATGAGAGACTCAATGCTGAATTGGCATCGTCAGAGGCTACAAGAACGGCAAAAGACCAGGATAAGATCCTGAAATTAAAGCAGGACATAGCAGTTGCTGAAACTAAGCTAGTTGAGCTGGAGAATGAGAGACAGCGTATGTATGCTAATGCTACTACAGGTCTTTTAGGTGGAACAGGTCAATCTACCCAAGGAATGGGGGAAGATGCTAAACAGCAACAAGATTACGTTAATAACCAACAAGGGTATGCAGAAGCTTTAAGCAACCTGCAAGCTATCAACTCAGAAGCAACAGCAGTTGGTACTAACCTAGGTAACGTAATGAACGCCGTTATGCTGTACGCAGATGGTGCACTAGATGCAACATCAACAGCAGCAGCAGGTATGCAATTGTTAAGCAGTGTATTTAATATGTCTGCTAAACAACAAACATCAGCTATCGATATGGCTATCAAAGCAGAGCAGCAACGCGATGGTAAGTCAGAGGAATCCAAAGCTAAGATCAAGAAATTGGAAGCTGAAAAGGTTAAGATCCAGCAAGAATCGGCGAAGAAACAGATCCTGATTCAAACTGCAACCGCAGTAATGCAAGCAGCTAACGCAGTACCATACCCTTGGTCTATTCCGTTAATGATTGCAGCGGCAGCATCAGGTGCAATGGCTTATGCTCAAGCGTCTAACCCAGTAAACCCATCTATGGATGTAGGGGGTGGCGAGACAGGCTACCTTAAACTGGGGGAGCGTGAGAATAGATTCGACGTATCTCAAAGCGGTAACGCTGGTGAACTTGCGTACACACGCGGTGAAAAAGGTATTGGGTCAGCTCAAAACTTCATACCACGTGCTGAAGGCGGTACAACACTTCCCGGGGTTGGATATATCTATGGGGAACATGGTGTTGAGATTGCAACCTCCGGAGTACCTGGACGTGTTACATCTAACGACAATATCGGAAGTGGGGGTAGCGGGGGTAACACTACTGTTGTCCACATCAACACTATCGACGCAGCTTCCTTTGCCGAGTTTGCCTCTAGGAATAAGGAGACTTTCAGAGACGCAGTAGAATGGTCACTGAATGAAGAAGGTGCTACACTAGTACGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
85461bede3f5295185bbe416646c74232c2ac06a9d5f894b96eaaad189485b0e
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,4272
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Novel bacteriophages targeting Providencia spp. as potential agents for phage therapy Rakov,C., Alkalay-Oren,S., Coppenhagen-Glazer,S. and Hazan,R. 2021-04-02 — GenBank