Protein

View in Explore
Genbank accession
YP_009622174.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MSFVFSEIVKTLQFILLRVIYDNFDTIVHAGHREIIRQQGVGVTIVRFRNGLRVTMRRDERLRYFMDFENVPYPQETRGFTITLGKGKNLVNHRVMNDVGVRLNAFLGDSAYSSNKSLMMRFALDWASKDLRINTPSWFSRFFGTTTINHNGGILSELPHLTVRHTTDWKWLEGNSKVKVEVELLGGVRETIYMVPE
Physico‐chemical
properties
protein length:197 AA
molecular weight: 22857,05850 Da
isoelectric point:9,78097
aromaticity:0,11168
hydropathy:-0,20254

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage Aphrodite1
[NCBI] 		2070057 Uroviricota > Caudoviricetes > Chimalliviridae > Aphroditevirus > Aphroditevirus aphrodite1
Host Vibrio alginolyticus
[NCBI] 		663 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009622174.1 [NCBI]
Genbank nucleotide accession
NC_042100 [NCBI]
CDS location
range 72895 -> 73488
strand +
CDS
ATGTCATTTGTCTTTTCAGAAATCGTAAAAACACTGCAATTCATTTTGCTTCGTGTCATTTACGATAATTTCGATACCATCGTACATGCCGGTCATCGTGAGATCATTCGTCAACAAGGTGTCGGGGTAACGATTGTTAGATTTCGTAATGGGTTACGAGTAACCATGCGACGTGATGAACGTCTTCGTTATTTCATGGATTTTGAGAACGTTCCTTATCCCCAAGAAACCCGGGGGTTCACCATTACACTTGGTAAAGGTAAAAACCTAGTCAATCATAGGGTAATGAATGACGTCGGGGTGCGGCTTAATGCCTTTTTGGGTGACTCCGCTTATTCCAGCAATAAAAGTCTCATGATGCGATTTGCTTTAGATTGGGCTAGTAAGGATTTACGCATTAATACCCCTAGTTGGTTTAGTCGGTTCTTTGGCACCACCACGATTAACCATAACGGTGGGATCTTGAGTGAACTACCTCATCTGACCGTCCGACATACAACCGACTGGAAGTGGTTGGAAGGAAACAGTAAAGTCAAAGTTGAAGTAGAACTCTTAGGTGGAGTTCGAGAAACCATTTACATGGTACCGGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c5873b46dae0bb5377cec430adb3a3bc63950f1069f12c27da2bf75203c30d45
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3368
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Phage resistance in Vibrio sp. unravels a complex metabolic adaptation strategy Skliros,D., Kalatzis,P.G., Katharios,P. and Flemetakis,E. 2021-04-10 — GenBank