Protein

View in Explore
Genbank accession
QHR72583.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,87
TF
Evidence RBPdetect2
Probability 0,89
Protein sequence
MSDNPLYGHDGRGHFRGVSLVEVPQNKSLEFVDILTSESTLDPTMLDSSQSYGLEFIKQASREGALAHLGITNEMLTPGTEGPQGPKGDPGPQGIQGNPGPKGEKGEPGPVGPEGPKGDPGSPGKEGPQGLQGAQGEVGPQGPQGPIGPAGLVWKGAWDESTQYSKDDAVGYQGASYFCISSNTGTIPPSEGVWALLANIGAPGPQGPTGPTGPQGPQGAPGQDGNGFIWAGNWALGSSYYINDLVQCEGSSWICIQDNIANNDSYPGSGDLWADYWNLFVKEGRPGNPGEDGAPGEQGAQGPQGDPGPKGEKGEPGPQGIQGPIGPAGAPGKDAVFDVDSLTQSQLKSLYDKLFPFYPPRYWKGSLRFDKPLNTSEWKEIRLWDLNMVLHVRMYSSVGIHIRATNAGLTNRLDIKRFTNYENGIECANWSNVLWSSSPELFDDLAYSSARQFNRYEIFDRDTRKYYTVSVFIVGGPLNTTTDIPVEVLFSVEDHTNMSTF
Physico‐chemical
properties
protein length:501 AA
molecular weight: 53551,42690 Da
isoelectric point:4,60910
aromaticity:0,09581
hydropathy:-0,59501

Domains

Domains [InterPro]
DC_0518
ATT
2–80
DC_0518 DC_1060 DC_1819
IPR050149
Unmapped
78–332
IPR050149 DC_0588
IPR008160
STR
78–130
IPR008160 IPR036573 G3DSA:1.20.5.320 IPR008160
G3DSA:2.10.10.20
ATT
156–196
G3DSA:2.10.10.20 G3DSA:1.20.5.320
QHR72583.1
1 501
Architecture
ATT
STR
ATT
STR
RBD
ATT 2-80 | STR 81-155 | ATT 156-196 | STR 197-353 | RBD 354-501
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage dhabil
[NCBI] 		2696390 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli K-12
[NCBI] 		83333 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QHR72583.1 [NCBI]
Genbank nucleotide accession
MN850621.1 [NCBI]
CDS location
range 145768 -> 147273
strand +
CDS
ATGTCAGACAATCCATTATACGGGCATGATGGTAGAGGCCACTTTAGAGGCGTATCATTAGTAGAAGTTCCACAGAACAAATCATTGGAATTTGTGGACATACTCACTAGTGAAAGCACCTTAGACCCTACTATGCTAGATTCTTCTCAAAGCTATGGACTTGAATTTATAAAACAAGCTTCTAGGGAAGGCGCGTTGGCCCATTTAGGTATAACTAATGAGATGCTAACACCTGGTACTGAAGGTCCACAAGGCCCTAAAGGAGACCCAGGGCCGCAAGGTATTCAAGGTAACCCCGGTCCTAAAGGAGAAAAGGGCGAACCAGGACCAGTAGGTCCAGAAGGTCCTAAAGGAGACCCGGGTTCACCAGGAAAAGAAGGCCCTCAGGGTTTACAAGGGGCCCAAGGAGAAGTAGGACCGCAAGGACCACAAGGTCCTATAGGCCCGGCAGGTTTGGTGTGGAAGGGAGCCTGGGATGAATCTACCCAATACTCTAAAGACGATGCAGTTGGATACCAGGGAGCTTCTTATTTTTGCATCAGTTCTAATACAGGAACAATACCTCCTAGCGAAGGAGTTTGGGCACTATTGGCTAATATCGGTGCACCAGGTCCTCAAGGACCAACAGGCCCAACCGGCCCTCAAGGTCCACAAGGCGCGCCAGGCCAAGATGGTAATGGGTTTATCTGGGCCGGAAACTGGGCCCTTGGTTCGTCTTATTATATAAACGATTTGGTCCAGTGCGAAGGGTCTTCTTGGATTTGTATCCAGGATAATATAGCAAATAATGATAGTTATCCTGGGAGTGGAGACCTGTGGGCCGATTATTGGAATTTATTTGTAAAAGAAGGGCGTCCAGGAAATCCCGGAGAAGATGGTGCACCTGGAGAGCAAGGTGCCCAAGGACCGCAAGGCGACCCAGGTCCTAAAGGTGAAAAGGGTGAACCCGGGCCACAAGGTATTCAAGGTCCTATAGGTCCTGCAGGTGCGCCAGGCAAAGATGCAGTATTTGATGTCGATTCTTTAACCCAGTCTCAATTAAAATCTTTATATGATAAACTTTTCCCATTCTATCCACCTAGATATTGGAAAGGCTCTTTAAGATTTGATAAGCCTCTGAACACTTCAGAGTGGAAGGAAATACGTTTGTGGGACCTTAATATGGTTCTTCATGTTCGCATGTACTCATCTGTAGGCATCCATATAAGGGCTACTAATGCAGGTCTTACTAATAGGCTTGATATTAAAAGATTTACCAACTATGAAAACGGAATAGAATGTGCCAACTGGAGTAATGTGTTGTGGTCATCATCTCCTGAATTATTCGACGATTTGGCTTATTCTAGTGCAAGACAATTTAACCGTTACGAAATATTTGACCGTGATACTAGAAAATACTACACTGTATCTGTGTTTATTGTAGGCGGCCCTCTTAATACGACTACAGATATCCCTGTTGAAGTTTTATTTTCTGTCGAAGACCATACCAATATGAGCACGTTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
01e9729219a368e439f6c1704d0acda89cbfd9f89b8b7b5fe3eabdef34845053
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6078
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Exploring the Remarkable Diversity of Culturable Escherichia coli Phages in the Danish Wastewater Environment Olsen,N.S., Forero-Junco,L., Kot,W. and Hansen,L.H. 2020 — GenBank