Protein

View in Explore
Genbank accession
XCN26881.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MAISNGPNLGIMVNGALGDQHYNQFMSFLRAVDGLLMGHAKSATTTAQPASPADGDVYVLPASPTGTNWSGQGQRIARYSSAATAWEFFVPKKGWTISVEDTNSTYWYDGSAWKFLRGYGTTANRPAASAALIGGQYFDTTLGKPIWSTGSAWVDATGLAV
Physico‐chemical
properties
protein length:161 AA
molecular weight: 17077,83340 Da
isoelectric point:6,70822
aromaticity:0,12422
hydropathy:-0,14783

Domains

Domains [InterPro]
DC_0494
STR
1–160
DC_0494
IPR021251
STR
29–114
IPR021251
XCN26881.1
1 161
Architecture
STR
STR 1-160 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PaeS_FBPa53
[NCBI] 		3231242 No lineage information
Host Pseudomonas sp.
[NCBI] 		306 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCN26881.1 [NCBI]
Genbank nucleotide accession
PP813866.1 [NCBI]
CDS location
range 29965 -> 30450
strand +
CDS
ATGGCTATCAGTAACGGCCCGAACTTGGGCATCATGGTGAACGGGGCGCTGGGGGACCAGCACTACAACCAATTCATGTCTTTCCTCCGTGCGGTGGACGGCCTTCTCATGGGCCACGCGAAGTCCGCGACCACGACCGCCCAACCGGCTTCGCCCGCGGACGGGGACGTGTACGTGCTCCCGGCGAGCCCGACCGGCACGAACTGGTCGGGTCAGGGCCAACGGATCGCGCGTTATTCGAGCGCGGCGACGGCCTGGGAGTTCTTCGTGCCGAAGAAGGGGTGGACCATTTCCGTGGAGGATACCAACAGCACCTACTGGTATGACGGCAGCGCGTGGAAGTTCCTCCGCGGCTACGGCACGACCGCGAACCGTCCGGCGGCGAGCGCCGCCTTGATCGGGGGCCAATACTTCGACACTACCCTGGGCAAGCCGATATGGTCCACGGGCTCCGCCTGGGTGGACGCGACTGGTTTGGCCGTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
78c42a5aab3f682f4fa79220a19cb77a1e54c5320d61b38338c189c30080a6cc
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8478
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Defense systems in Pseudomonas aeruginosa van den Berg,D.F. and Costa,R.A. 2024-11-19 — GenBank