Protein

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Genbank accession
XCO36826.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MALDELVKVKFPVLQERQYLSSRIKAGTLADSAIVAGLNENPGSILVVDIPVQVNSVVMPDNSILILAAQITHRASASGHMLIPGSACTILGLGDAGGLNGNASNNSVQWRAVSCVNKSNVVLEDFFITNTKSAAAYFEGCTDTRTHKLRISNVVGTGEYAGGIYVTNCIRHKSSYNLIMDVNTNGIKFRADTLGLTYGCSSDHDTIYRAGFIGIANGKCQNHKVTNWYAVDCVDNGVDMNGCYDVVFDGGTSLRCQDGMYIGENNIDLCSVRNSAAIDCKRAGIGSLGSLTNCTMLDNFIDKCGSGIYASGYVGLTIRGNIIRNSSKKTYTDNETGTVKVSTGHGIDIQANLSAAYKTDIINNSFMSNAGYDVYWGAGTVADARMLDNDFVNTFGDGKVYRGSTFTNYQSKDNRGYRNEATLILNVSGDGTTGVVSVNLPFTAANTDYTVESVVPDWLSTYRVLRTGQTTTGFSIEFGTAVPAGTRRVVVRVTGLVQA
Physico‐chemical
properties
protein length:499 AA
molecular weight: 53343,31850 Da
isoelectric point:6,17944
aromaticity:0,08016
hydropathy:-0,06172

Domains

Domains [InterPro]
DC_1867
ATT
1–85
DC_1867 IPR011050
IPR012334
STR
191–454
IPR012334
DC_0592
RBD
335–499
DC_0592
XCO36826.1
1 499
Architecture
ATT
STR
RBD
ATT 1-85 | STR 87-454 | RBD 455-499
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCO36826.1
1 499
Domain Start End Length (AA) Confidence
N-terminal 1 30 30 0,9392
Central domain 31 418 389 0,9939
C-terminal 419 499 80 0,9890
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-30
Central
31-418
C-terminal
419-499

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage phi1_146001
[NCBI] 		3232187 Viruses >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCO36826.1 [NCBI]
Genbank nucleotide accession
PP889457.1 [NCBI]
CDS location
range 3667 -> 5166
strand +
CDS
ATGGCGTTAGATGAACTTGTAAAAGTAAAATTCCCGGTATTGCAAGAGCGGCAATATCTTAGCTCCAGAATTAAAGCGGGAACCTTAGCAGACTCAGCTATAGTAGCAGGCCTGAATGAGAATCCGGGCAGTATCCTAGTCGTGGATATCCCTGTTCAGGTAAACTCAGTGGTTATGCCGGACAATAGTATACTGATACTGGCCGCCCAGATAACGCACCGGGCATCCGCCAGCGGGCACATGCTTATTCCGGGGAGCGCGTGTACCATCTTAGGTCTAGGGGATGCCGGTGGGTTAAACGGTAACGCCAGTAATAACTCGGTACAGTGGCGCGCGGTTAGTTGTGTAAATAAGTCCAACGTAGTTCTTGAGGACTTCTTCATAACTAACACTAAATCTGCTGCTGCATACTTCGAAGGTTGTACAGATACACGTACACACAAACTCCGTATTAGCAATGTGGTAGGTACAGGGGAATACGCGGGCGGCATCTACGTCACGAACTGTATACGGCACAAGTCCAGCTACAACTTAATCATGGACGTAAATACTAACGGCATCAAGTTCAGGGCAGATACTCTAGGCCTTACTTACGGATGCAGTAGCGACCACGATACCATCTACCGTGCCGGTTTCATCGGCATAGCTAACGGTAAATGCCAGAACCACAAAGTTACAAACTGGTATGCTGTAGACTGCGTGGATAACGGCGTGGACATGAACGGTTGCTATGATGTTGTATTCGATGGTGGTACTAGTCTTCGTTGTCAGGACGGGATGTACATCGGAGAGAACAACATTGACCTGTGCAGTGTACGTAATAGCGCAGCCATTGACTGTAAACGTGCTGGTATCGGCTCCTTGGGTAGCTTAACGAACTGTACTATGCTGGATAACTTCATAGACAAGTGCGGTTCCGGTATCTACGCCTCTGGCTATGTAGGACTAACTATACGCGGCAACATTATCCGCAACAGCAGCAAGAAGACGTATACGGATAACGAAACCGGGACGGTCAAGGTTAGTACTGGTCATGGTATTGATATACAGGCGAACCTGTCTGCCGCCTATAAGACCGACATCATCAATAACTCGTTCATGAGCAATGCCGGGTATGACGTGTACTGGGGAGCTGGGACTGTAGCGGATGCGCGCATGCTGGACAACGATTTTGTGAATACCTTTGGTGACGGTAAAGTGTATCGTGGTAGTACTTTCACAAACTATCAGTCCAAGGACAATAGAGGGTATCGTAACGAAGCTACTTTGATACTGAACGTATCCGGTGATGGCACCACTGGAGTGGTCTCTGTTAACCTGCCCTTTACAGCGGCGAATACTGACTATACGGTAGAGTCTGTTGTCCCGGATTGGTTGAGTACGTACCGGGTATTGCGAACCGGACAAACTACAACCGGCTTCTCCATAGAGTTTGGAACAGCTGTACCTGCTGGCACTAGGAGAGTGGTGGTTCGCGTTACAGGTTTAGTTCAAGCCTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
322360387fdbe9af03fd3682e382dc8b54557cf19b3ec0af6719bf082398dcc5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8812
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The complete genome of Klebsiella pneumoniae phages Fang,Q., Luo,H., Feng,Y. and Zong,Z. 2016-02 — GenBank