Protein

View in Explore
Genbank accession
WQZ26440.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MADYKLSQLNSIDTIRSEDLLHIRVKKRPEMLGDEDRRMTYQDFLASFKLERFVQIAGSTMTGDLGIVKLLYGGKAVFDPTGSSEINIGDVLKTFKINANGLKLTVADASRSATVYHTLNKPSPNELGMRTNEENDARYAKLSANNIFTSQQTIQANGEAIRLKNSSENSPLYIRGQDSAGENRWYIGNGSGGDNVTIRNHKTDCEVILSSVVAINKTLSITGQVKPSDFSNLDARYFTQTVANQRFAQLAGNNTFTGANTFRTMSVISNAAAITLQCASANESLYLLAKDYEGGNLWYLGKDSSGAGVTIYNYTTNTSLFLDAAGVSANKNVRITGQVQPSDWTNIDSRYIPVATLSNLAKINVSNTFTNVQTIVSNNEGVVLKNLTQGQPQYIRGVDTANVSRWWVGVGDANSTDVALNNSFSGTQITLMTSAIKANKNLTITGQVQPSDWSNLDARYFLKTKLLNQSLMTRTANRLDDPSSFNKDYSGFVRNNNIEQGLKDLAIHVAHAAGIAHARGIAFEYGSTGLNVFTYAYGKNGDYAGEAQIYTTAFKPTPSEIGAYTKAETDQKIAEAISDSTDLNKIYPVGIVTWFNSNVNPNTALPGLTWTYLNNGVGRTIRIAAANGSDVATTGGSDSVTLSVGNLPSHTHSFSGTTSWFDYGTKYTDGQGAHDHDRGNMEISGDFGFFRSDANNFYTASGAFAISGSQASRGFTGSKFTYGTPVNFYASRTWTGRTSWVGAHAHGVGIGAHNHTVSGNTGVTGSGSAFSVTNQFYKLMAWVRTA
Physico‐chemical
properties
protein length:786 AA
molecular weight: 84973,13420 Da
isoelectric point:8,42010
aromaticity:0,09669
hydropathy:-0,33995

Domains

Domains [InterPro]
DC_0032
ATT
1–262
DC_0032 G3DSA:6.20.80.10 G3DSA:6.20.80.10 DC_2042
G3DSA:6.20.80.10
STR
157–217
G3DSA:6.20.80.10 IPR048388 IPR048388
IPR048388
ATT
159–246
IPR048388 DC_0026
WQZ26440.1
1 786
Architecture
ATT
ATT
STR
ATT
STR
RBD
ATT 1-262 | ATT 271-359 | STR 360-380 | ATT 381-465 | STR 466-675 | RBD 716-786
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WQZ26440.1
1 786
Domain Start End Length (AA) Confidence
N-terminal 1 83 83 0,8135
Central domain 84 282 200 0,2045
C-terminal 283 786 503 0,8313
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-83
Central
84-282
C-terminal
283-786

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage Tf
[NCBI] 		3110416 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Shigella flexneri 2b
[NCBI] 		1288825 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Shigella > Shigella flexneri

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WQZ26440.1 [NCBI]
Genbank nucleotide accession
OR980947.1 [NCBI]
CDS location
range 39464 -> 41824
strand +
CDS
ATGGCAGATTACAAATTGAGTCAATTAAACTCAATCGACACAATTCGTTCAGAAGACCTATTGCACATCAGAGTTAAGAAAAGACCTGAAATGTTGGGTGACGAAGACCGTCGAATGACCTATCAAGACTTCTTAGCATCTTTTAAACTAGAAAGATTTGTTCAGATTGCTGGTAGCACTATGACGGGTGACTTAGGAATTGTTAAGTTACTTTATGGTGGTAAGGCAGTCTTTGACCCAACAGGCTCTTCTGAGATTAATATTGGTGATGTTTTAAAGACTTTTAAAATCAACGCAAATGGTCTTAAGTTAACCGTTGCAGATGCTTCAAGGTCTGCAACTGTTTATCATACTCTTAATAAACCAAGCCCTAATGAACTTGGGATGAGAACCAATGAAGAGAACGATGCAAGGTATGCAAAACTATCTGCAAATAACATCTTTACATCCCAACAAACTATCCAAGCAAATGGTGAAGCTATTAGGTTAAAAAACTCTTCTGAGAACTCACCGTTGTATATCAGAGGTCAGGATAGTGCTGGTGAGAATAGATGGTATATCGGTAATGGTTCAGGGGGTGATAATGTTACTATCCGCAACCACAAGACAGACTGTGAAGTTATTCTATCTAGTGTCGTGGCTATCAATAAAACATTAAGCATCACGGGTCAAGTCAAACCTTCTGACTTCTCTAACTTAGATGCTAGATATTTCACTCAGACAGTCGCTAATCAGAGATTTGCACAGTTAGCTGGCAATAACACCTTTACAGGTGCTAACACATTTAGGACTATGAGTGTTATTTCAAATGCTGCTGCCATCACACTGCAATGTGCATCAGCAAACGAATCCCTGTATCTACTTGCAAAAGATTATGAAGGTGGAAACTTATGGTATCTTGGTAAAGATAGTTCAGGTGCTGGTGTAACTATCTACAACTATACCACTAACACCTCTTTGTTCTTAGATGCTGCTGGGGTATCAGCAAATAAAAATGTCAGAATCACTGGACAAGTTCAACCTTCAGATTGGACTAACATTGACTCTAGATACATTCCAGTAGCTACTTTGAGCAATCTTGCTAAAATTAATGTGTCTAACACTTTCACAAATGTGCAGACTATTGTATCAAATAATGAAGGTGTAGTATTAAAGAACTTAACACAGGGACAGCCGCAATATATCCGTGGTGTTGATACTGCGAACGTATCTAGGTGGTGGGTAGGTGTAGGTGATGCAAATTCTACTGATGTAGCCTTAAACAACAGCTTCTCTGGGACTCAAATTACTCTTATGACTTCAGCGATTAAGGCTAATAAGAATCTAACCATTACTGGTCAAGTACAACCTTCTGATTGGTCTAACTTAGATGCTAGATATTTCTTGAAAACAAAACTATTAAACCAATCTTTAATGACAAGGACAGCTAATAGACTGGATGACCCATCATCATTCAACAAAGATTATTCAGGGTTTGTAAGAAATAATAACATAGAGCAGGGTCTGAAAGATTTAGCCATCCATGTAGCACATGCTGCTGGTATTGCTCATGCCAGAGGTATTGCTTTTGAATATGGGTCTACAGGTCTTAATGTCTTCACATATGCCTATGGCAAAAATGGTGACTATGCCGGAGAAGCACAGATTTATACAACTGCTTTTAAACCAACCCCTTCAGAAATTGGTGCATACACTAAAGCTGAAACTGACCAGAAGATTGCAGAAGCGATTAGTGACTCTACAGACCTTAATAAAATCTATCCAGTAGGTATTGTAACGTGGTTTAACAGTAATGTTAACCCTAATACAGCACTTCCTGGTCTAACTTGGACGTACCTGAATAATGGTGTTGGTAGAACTATTAGAATTGCAGCAGCAAACGGTTCAGATGTTGCTACAACTGGTGGTTCAGACTCTGTAACGTTGTCTGTTGGTAACTTACCTTCACACACGCATAGTTTCTCTGGAACGACTTCTTGGTTTGACTATGGAACTAAGTACACAGACGGTCAGGGTGCTCACGACCATGACAGAGGTAACATGGAAATCTCTGGTGACTTTGGTTTCTTCAGAAGTGATGCAAATAACTTTTATACAGCAAGTGGGGCATTCGCTATCTCAGGTTCACAAGCCTCTAGGGGTTTTACTGGCTCTAAGTTCACTTATGGTACACCTGTCAACTTCTACGCATCAAGAACTTGGACAGGGAGAACAAGCTGGGTAGGTGCTCATGCACATGGTGTAGGTATTGGTGCTCACAACCATACGGTAAGTGGTAACACAGGTGTCACAGGTTCTGGTTCAGCATTTAGTGTCACTAACCAATTCTATAAGTTAATGGCTTGGGTAAGAACTGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
325925f53be19b1f556a62fdeb29dd7662f6ef20f17227afaa0dfff00c4bc498
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6884
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50