Protein

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Genbank accession
WDS51311.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,96
Protein sequence
MISQFNQPRGSTSIEVNKQSIARNFGVKEDEVVYFTVGIDLSGFKVIYDESTQRAYSLPSGIVSGTIAISLNEQAILTHSSGSVDLGELAVSREEYVTLTGSFTFGQTVNTKNELLVHADAKYRWDGALPKVVPAGSTPASTGGVGLGAWVSVGDAAFRQEANKKFKYSVKLSDFTTLQDAVTAAVDGLLIDTDYHFTDGDIVDFGGKAITIDCKAKFIGDGVLNWNNLGIGSKVISPHMHTKTTPYTVYRFDDSGNWVTNPTTVLASVAQRLDKGYKPNVNDQDIWASLPDSVKNQVAGATLRINSADNIKIIHPEATMGGYLFTLCNRILVESPRNFIAWESGITFENHHTSAWGTGNWVVGGEIKYGSGSAVLFIRNDGGDDHDGGVRDLISYRVGESGVKTYQNEIGGRSARNYRLVFDNITTIQCYYDGIDVNADTGPATERVDDYSLAEYPWFHLPTKHIIRNIITRDCMGIGAWWDGQLNIIDNVITYEAHKEGIFDRGTNNDITNVTVIGANKDLTNLNQLTCEGGSRLRGVMIHAYTTQGYAVYAPTSEISNVACAGSGTKLILCTYVGDIQGGNINVQHGDNTMTLAMRPAMGGTTNPSLLMTADCQVALPGGEASIVHLSAIQEGVRVAEMQLNRLGFKHMSIPAASSQLPESALEHNSSVGFFFGSDGALRLLAKKPDGSYVTYSL
Physico‐chemical
properties
protein length:698 AA
molecular weight: 75479,68670 Da
isoelectric point:5,35511
aromaticity:0,08739
hydropathy:-0,16447

Domains

Domains [InterPro]
G3DSA:3.30.2020.50
ATT
1–94
G3DSA:3.30.2020.50 G3DSA:2.10.10.80 IPR012332
G3DSA:3.30.2020.50
ATT
1–100
G3DSA:3.30.2020.50 G3DSA:2.10.10.80 IPR015331
IPR040775
RBD
90–155
IPR040775 IPR011050
WDS51311.1
1 698
Architecture
ATT
STR
ATT 1-159 | STR 160-698
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WDS51311.1
1 698
Domain Start End Length (AA) Confidence
N-terminal 1 176 176 0,9883
Central domain 177 582 407 0,9880
C-terminal 583 698 115 0,8920
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-176
Central
177-582
C-terminal
583-698

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SeF3a
[NCBI] 		2876784 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WDS51311.1 [NCBI]
Genbank nucleotide accession
ON809763.1 [NCBI]
CDS location
range 142828 -> 144924
strand +
CDS
ATGATTTCTCAATTCAATCAACCACGCGGCTCCACTTCCATAGAAGTTAACAAACAATCTATCGCTCGAAATTTCGGTGTCAAAGAAGACGAAGTCGTTTATTTCACTGTCGGTATTGACCTCAGTGGATTTAAAGTAATTTATGATGAGTCTACCCAACGGGCTTATTCTCTTCCTTCAGGGATTGTTTCGGGGACGATTGCAATAAGTCTGAACGAACAAGCTATCCTCACTCATTCTTCTGGTTCTGTTGACCTTGGGGAATTAGCAGTAAGCCGCGAAGAATATGTGACGCTTACGGGTTCTTTCACTTTTGGTCAGACCGTCAACACTAAAAATGAACTTCTTGTTCATGCTGATGCGAAATACCGTTGGGATGGTGCATTACCTAAAGTTGTTCCTGCTGGTTCAACTCCAGCATCAACTGGTGGCGTTGGCTTAGGTGCTTGGGTTAGTGTTGGTGATGCTGCATTTAGGCAGGAAGCTAATAAGAAATTCAAATATTCGGTTAAATTATCAGACTTTACAACGCTGCAAGATGCAGTTACTGCTGCCGTTGATGGCCTTCTTATTGATACTGATTATCACTTCACAGATGGTGATATCGTTGATTTTGGTGGTAAAGCTATAACTATTGATTGTAAGGCGAAGTTCATAGGAGACGGTGTTCTTAATTGGAATAACCTAGGGATTGGATCTAAAGTTATTTCTCCGCATATGCATACCAAGACCACTCCTTATACTGTATACCGTTTCGATGATAGTGGAAACTGGGTAACAAACCCAACCACAGTATTAGCATCTGTTGCCCAGAGACTTGATAAAGGTTACAAACCTAATGTTAATGACCAGGACATTTGGGCATCTCTACCTGATTCCGTTAAAAATCAGGTTGCTGGGGCGACACTACGAATTAACTCCGCTGATAATATTAAGATAATTCACCCGGAAGCTACTATGGGGGGCTATCTATTCACCCTATGTAACCGCATCCTAGTTGAATCCCCGCGTAACTTTATCGCATGGGAATCTGGAATTACCTTTGAAAACCATCACACATCAGCATGGGGCACTGGCAACTGGGTGGTCGGTGGTGAGATAAAATACGGTTCTGGCTCCGCAGTTTTATTTATCAGAAATGACGGTGGTGATGATCATGATGGAGGGGTAAGAGATTTAATATCCTATCGCGTTGGAGAATCTGGTGTTAAAACCTATCAAAATGAAATAGGTGGACGTTCAGCCAGGAACTACCGATTAGTGTTTGATAACATAACTACAATCCAGTGTTACTACGATGGTATTGATGTTAATGCTGACACCGGTCCAGCTACTGAACGTGTAGATGACTACTCATTAGCTGAATACCCGTGGTTCCACCTACCTACAAAACATATCATCCGTAATATCATTACTCGTGATTGCATGGGAATTGGTGCATGGTGGGATGGTCAACTGAACATTATTGATAATGTTATTACCTATGAGGCTCATAAAGAGGGTATTTTTGATAGAGGTACTAACAATGATATTACTAATGTAACAGTTATAGGTGCAAACAAAGATTTAACTAACCTAAATCAGCTTACATGTGAAGGTGGCAGCAGATTGCGAGGCGTTATGATTCATGCATACACCACACAAGGATATGCTGTTTATGCGCCAACATCTGAAATTAGTAATGTAGCGTGTGCAGGGTCTGGCACTAAACTTATACTTTGTACGTATGTTGGTGATATTCAGGGTGGGAACATAAACGTACAGCACGGTGATAACACCATGACCCTGGCTATGCGTCCAGCAATGGGGGGAACAACAAACCCATCATTGCTTATGACAGCAGATTGCCAAGTGGCGTTGCCAGGAGGTGAGGCAAGTATTGTTCACCTGTCAGCTATACAGGAGGGTGTACGCGTAGCTGAGATGCAGCTTAACCGACTTGGCTTTAAGCATATGAGCATACCTGCTGCCTCTTCACAATTACCAGAGAGCGCTTTGGAACATAACTCGTCTGTAGGATTCTTTTTTGGCTCTGATGGAGCATTGCGACTTCTTGCTAAGAAACCCGATGGGTCATACGTAACATACTCACTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b15d7ac24e37f9e5bf6e86b1da3763d59be532242a6b5ac574e96b009f96bcbe
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6883
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50