Protein

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Genbank accession
AUR83926.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
ATPGGLVDKQELIDAQLDTAHLGRVVNSKDASGAPISTSTNRTGGVNKTLDALEAEYQEAVDNAQIENYAGLWPDTGGSANKGETWQTQTGGTPTGQYFRALQNTTVDPVGDDVNWREVVSHESLSQYTDIVYKASGGNSAVENMLAGIPLQIEVGEVCKCENGTLFIRTGNSSGDISDYTSLNDPNTRDFGAVGGDTTKDTQGFLLAIAAARSTGAKIHAPATGVMFPYKINKRLYFGPLTEADTLLQPTQSRNICSGMTGDGENSTWFDVSEFDVNEDVFIDMSGLREKYLDGFSITSNSDTTCPNVGILTARYLRPSLGATTPTNNDFGKFSNVKMYGYYKFTNYLAHATEDIVVEQCRFYNKHDDLLGPWVSTSILPVEGYMPTESPLTDMEFITGQQSNLHQTHINCDYAIDTENPTRGTSVVAQNWIYGSLMVRVESPFYNNNAVNYDTVRVDRAVPTDPYIYGIHVINANYHQTVKSGFKTLCPTVNCSVTQSNRTVGFEDGAVVLGGFTTDFNSDFLDGDLVVGGDMINCSISSIRDLKWDLSYAIKNCDINVRGQIDKSLSGTERQDNYVEIVNNDTKVIVKGKYDLEPVNSALEVRASRVGLPAIAATSDNGSFDSSLLSMNMRTTSSAGFNHFECIEQGSVKAEMRKGGFLVFEDSTAGVVLRSANGTRYRLRVADNGDLSTGVL
Physico‐chemical
properties
protein length:696 AA
molecular weight: 75646,91040 Da
isoelectric point:4,67696
aromaticity:0,08621
hydropathy:-0,34037

Domains

Domains [InterPro]
DC_1322
ATT
11–179
DC_1322 IPR012334
DC_0685
STR
178–234
DC_0685
IPR011050
STR
187–478
IPR011050
DC_1426
STR
226–696
DC_1426
AUR83926.1
1 696
Architecture
ATT
STR
ATT 11-179 | STR 180-696
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR83926.1
1 696
Domain Start End Length (AA) Confidence
N-terminal 1 199 199 0,9894
Central domain 200 594 396 0,9681
C-terminal 595 696 101 0,8805
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-199
Central
200-594
C-terminal
595-696

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.046.O._10N.286.52.E3
[NCBI] 		1881423 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio splendidus
[NCBI] 		29497 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR83926.1 [NCBI]
Genbank nucleotide accession
MG592428.1 [NCBI]
CDS location
range 1 -> 2093
strand +
CDS
TGGCAACTCCCGGTGGCTTGGTCGACAAGCAAGAACTAATCGACGCACAACTCGACACGGCGCACTTAGGTCGTGTCGTCAATTCTAAGGACGCTTCGGGCGCTCCTATCTCTACATCTACGAACCGTACGGGCGGCGTGAATAAAACGCTTGATGCGCTTGAAGCAGAGTATCAAGAGGCTGTAGACAACGCGCAAATCGAAAACTATGCAGGCTTATGGCCAGACACAGGCGGAAGTGCTAACAAAGGCGAAACTTGGCAAACCCAAACGGGAGGCACACCGACGGGTCAATACTTTAGAGCACTACAAAACACAACGGTAGACCCTGTTGGTGATGATGTTAATTGGCGAGAAGTTGTTAGCCATGAAAGTTTATCGCAGTACACCGACATAGTTTACAAAGCTTCAGGTGGTAATTCTGCCGTTGAGAACATGCTTGCGGGAATCCCACTCCAGATTGAAGTAGGTGAAGTTTGCAAATGTGAAAACGGGACGCTATTCATCAGAACGGGTAATTCTTCCGGTGATATTTCGGATTACACTTCATTAAATGACCCAAACACTAGAGATTTCGGGGCCGTGGGTGGTGACACAACTAAAGATACTCAAGGGTTCTTACTTGCGATAGCAGCCGCTCGTAGCACTGGCGCTAAGATACACGCCCCTGCCACAGGCGTAATGTTTCCTTACAAGATAAATAAGAGGCTATACTTCGGCCCTTTAACTGAAGCAGATACATTACTCCAACCAACCCAATCAAGAAATATCTGTAGCGGTATGACGGGTGATGGTGAGAACTCTACATGGTTTGATGTCAGTGAATTTGACGTTAATGAGGATGTATTTATCGATATGTCCGGGCTGAGAGAAAAGTATCTTGATGGATTCTCTATTACATCCAATAGTGATACAACCTGTCCAAACGTCGGCATACTCACAGCTAGGTATTTGCGACCATCTTTGGGCGCAACGACTCCAACAAATAATGATTTCGGAAAGTTCAGTAACGTAAAAATGTATGGTTACTATAAATTCACTAACTATCTAGCTCACGCGACGGAAGATATAGTTGTAGAACAATGTAGGTTTTACAACAAGCACGACGACTTACTTGGCCCTTGGGTTTCAACATCTATACTTCCCGTTGAGGGTTACATGCCAACAGAGTCACCACTTACAGATATGGAGTTTATAACAGGTCAGCAATCAAACCTCCATCAGACTCATATTAACTGTGACTATGCAATTGATACAGAAAACCCTACAAGGGGTACTAGTGTAGTAGCTCAAAACTGGATATACGGCTCTCTAATGGTTCGCGTTGAGTCCCCGTTTTATAATAACAATGCCGTTAATTATGACACCGTCCGTGTTGATAGGGCCGTACCTACAGACCCTTATATCTACGGGATACACGTAATCAACGCTAATTACCATCAAACTGTGAAATCAGGCTTTAAAACTTTATGCCCTACAGTTAATTGCTCTGTAACTCAATCAAACAGAACTGTTGGATTTGAAGACGGGGCTGTTGTTCTTGGTGGGTTTACTACTGATTTTAATTCAGATTTTCTCGATGGGGACTTGGTGGTTGGGGGTGACATGATAAACTGCTCGATAAGCTCCATCAGGGATTTGAAGTGGGATTTATCTTACGCAATTAAGAACTGTGATATAAACGTGAGAGGTCAAATAGACAAGTCATTATCCGGAACGGAAAGGCAAGATAATTACGTTGAGATTGTCAATAATGACACAAAGGTAATTGTAAAAGGTAAGTATGATCTAGAACCCGTAAATTCCGCACTAGAAGTTAGGGCGTCAAGAGTAGGGCTGCCAGCGATCGCTGCAACTAGTGATAATGGTAGCTTTGACAGCTCGCTATTATCTATGAATATGAGAACCACCTCCTCTGCGGGGTTTAATCATTTTGAGTGTATAGAGCAAGGTAGCGTAAAAGCTGAAATGCGAAAGGGTGGGTTTTTAGTGTTTGAAGATTCTACAGCGGGTGTTGTGCTGCGATCTGCAAATGGAACACGCTACCGATTGCGCGTGGCTGACAATGGAGATTTATCAACAGGAGTATTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
11d051adb223985b0daf56e9d441499144a4d184bafd9b7a0866727b2bf38bfb
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5771
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank