Protein

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Genbank accession
WGG14612.1 [GenBank]
Protein name
tail fiber
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,83
Protein sequence
MISNNAPAKMVLNSIMTGYTLAYVQHSIYTDYDVIGRSFWLKIGESIDRRDYTGIDTFFVMINNLTPSTSYEIQGAFYDSIIDSELLEAKIGINLSNETNFRTKEKPIIVAARSESEPVDVGVGAPIVVVETTGEANYCTIELKSTASEDSEWVKYYIGALGATIKFGGVPIGDYKIRISGQVTMPDGVTVDSSGYYEFPNILTVAYNFVPPTAPIDIVFKAARIADGKERYDVRIEWDWERGAGANVREFLVTYINSEEYAKTGWTKAQKINVGAARAATIMSFPWKVEHTFKVSSIAWGPNKQDVTDSIAQTFILNEDTPLDNSFVNETGIDVNYAFIRGSMKDGEIWRQTFLIDAATGAINIGLLDEEGKAPISFDPINRVVNVDGKVITRDINAANFIMTNLSGKDNPAIYTQGKSWGDNNSGIWMGMDNTSSKAKLDIGNATQWIRYDGDVLRISSGVVIGTPNGDVDLGTGMQGKQTVFVYKLATSLPAKPLEQDYPPPGWSKTPPNRTDMTQNIYATTGTLDPVTNRLLEGTSWSDVVQWSGTEGTIGADGQRGPGMYSVGIAGLGGWDDGQANSFFQSNFGSPPVKYDVLTQFNSNSPQIAFTRQWNGSGWVNPAMVLHGNMIVNGTITADKIVAGNAFLSQIGVNTIYDRAAALSGNPEAQYKMKIDLVNGYIHIR
Physico‐chemical
properties
protein length:685 AA
molecular weight: 74881,21430 Da
isoelectric point:4,80025
aromaticity:0,10219
hydropathy:-0,21387

Domains

Domains [InterPro]
IPR057550
STR
10–97
IPR057550 IPR057551 IPR057552 IPR057549
IPR057551
STR
103–197
IPR057551
WGG14612.1
1 685
Architecture
STR
STR
STR
STR
STR 10-97 | STR 103-197 | STR 211-335 | STR 350-664 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WGG14612.1
1 685
Domain Start End Length (AA) Confidence
N-terminal 1 408 408 0,9238
Central domain 409 607 200 0,2578
C-terminal 608 685 77 0,4193
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-408
Central
409-607
C-terminal
608-685

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage phC11
[NCBI] 		3038309 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica subsp. enterica
[NCBI] 		59201 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Salmonella

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WGG14612.1 [NCBI]
Genbank nucleotide accession
OQ680480.1 [NCBI]
CDS location
range 103879 -> 105936
strand +
CDS
ATGATTTCAAATAATGCACCAGCCAAAATGGTCTTAAATAGTATAATGACTGGATATACTTTGGCTTATGTCCAGCACTCCATTTATACTGATTATGATGTTATTGGTAGATCTTTTTGGTTAAAAATAGGAGAAAGTATAGATAGACGTGATTACACTGGTATAGATACTTTCTTCGTAATGATTAATAATCTAACCCCCTCTACCTCCTATGAGATTCAGGGGGCTTTCTATGACTCAATTATTGACTCAGAGTTACTGGAAGCTAAGATTGGTATCAACCTCTCTAATGAGACTAACTTTAGAACAAAAGAAAAGCCAATAATTGTTGCAGCAAGATCTGAATCAGAACCAGTCGACGTGGGTGTTGGGGCTCCGATAGTGGTTGTAGAAACTACCGGAGAAGCCAACTACTGCACTATTGAATTAAAAAGCACTGCATCAGAAGATAGTGAATGGGTTAAATATTACATAGGTGCGCTTGGAGCTACTATTAAATTTGGTGGAGTTCCTATCGGAGATTATAAGATCAGAATATCTGGTCAAGTAACTATGCCTGATGGTGTTACAGTTGATTCTTCTGGGTACTATGAATTCCCTAATATTTTAACAGTAGCTTATAATTTTGTTCCTCCTACTGCACCTATCGATATTGTTTTTAAAGCTGCACGAATTGCTGATGGTAAAGAACGCTATGATGTTAGAATTGAGTGGGATTGGGAACGCGGAGCTGGTGCTAATGTTCGTGAGTTCTTGGTTACTTATATAAACTCTGAAGAATACGCTAAGACTGGCTGGACTAAAGCTCAGAAGATAAATGTTGGTGCTGCTAGGGCTGCAACGATTATGTCATTCCCATGGAAAGTTGAACATACCTTTAAGGTTTCGTCAATTGCCTGGGGACCAAATAAACAGGATGTAACAGACTCTATAGCACAAACTTTTATACTTAATGAAGATACTCCTCTAGACAACAGCTTTGTCAATGAGACGGGTATTGATGTTAATTATGCCTTTATTAGGGGCAGCATGAAGGATGGAGAAATCTGGAGACAGACATTCTTAATCGACGCAGCTACTGGTGCTATTAACATTGGTCTGCTAGACGAAGAAGGAAAAGCACCTATTTCTTTTGACCCCATAAACCGTGTTGTTAACGTTGATGGTAAAGTAATTACTAGAGATATTAATGCTGCGAACTTTATCATGACTAACCTATCTGGTAAGGATAATCCAGCAATTTACACTCAAGGTAAATCTTGGGGAGATAATAACTCTGGTATTTGGATGGGTATGGATAATACCTCTTCCAAAGCTAAATTAGACATTGGTAATGCCACACAGTGGATTCGTTATGATGGTGATGTGCTACGTATTTCTAGTGGAGTAGTTATTGGAACTCCTAATGGCGATGTAGATCTAGGTACTGGTATGCAAGGTAAGCAAACAGTATTTGTTTATAAGTTAGCAACATCTCTACCTGCTAAACCACTAGAACAAGATTATCCGCCTCCTGGTTGGTCAAAAACTCCACCTAACCGTACAGATATGACACAAAATATCTATGCTACTACGGGTACACTTGATCCAGTTACTAATAGGTTATTAGAGGGTACTAGCTGGTCGGATGTAGTTCAGTGGAGCGGTACTGAAGGTACTATTGGTGCAGATGGCCAGAGAGGGCCTGGTATGTACTCCGTTGGAATAGCCGGGCTAGGTGGTTGGGATGATGGACAAGCTAATTCCTTCTTTCAAAGTAACTTCGGCTCCCCACCAGTTAAATATGATGTATTAACTCAGTTTAATAGTAATTCACCTCAAATTGCATTTACTAGACAATGGAACGGTTCTGGTTGGGTTAACCCAGCTATGGTACTTCATGGTAATATGATAGTTAATGGTACTATTACAGCGGATAAAATAGTAGCTGGAAATGCTTTTCTATCACAAATAGGTGTTAATACTATATATGATAGGGCTGCTGCACTATCAGGAAATCCTGAAGCTCAATATAAGATGAAAATAGATCTAGTAAACGGATATATTCATATAAGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6c92c8e099b080754f79ae76f5fdf967e2db8086e099103e7df1ae37ee192147
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7794
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Comparative analysis of effectiveness for phage cocktail development against multiple Salmonella serovars and its biofilm control activity Ribeiro,J.M., Pereira,G.N., Durli,I., Teixeira,G.M., Bertozzi,M.M., Verri,W.A., Kobayashi,R.K.T. and Nakazato,G. — — GenBank