Protein

View in Explore
Genbank accession
QIN96917.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,76
TF
Evidence RBPdetect2
Probability 0,72
Protein sequence
MADINISELPLISLATNDDVFIINDANATTSQITWSQLQNSIQQLTGQVTFSQGTATEPSITFTGDLNLGIFSPGLDTLGFSTNGAERMRIDPSGNVAIGLSAPSNFNAAANNLVVGNTASSDNGITVVASTADTGNLYFADGTGAGSEDAGQITYDHSDNHLHFSTAASERMRINAIGNVGIGTSAIKSNLHVRGGDSGVTTTPSNQSGIIIESGAAESGALQFFNAPGTNAYINFGDSGALDAGYIRYDHSDNSLRVQTLGAEKVHLTSAGDVAIGTGAPNATVLDVNKQATGGTSYTGIKSASEIQSDVTLDYRYFRSTASTQDATFNLTNLYHFSATQGTIGGTASIDNQYGFAVDSGMSGGTNNYGFYSGLNQAANTYGFYAAGTADHYFNGDNFIIANGGTEVARAVDTLFKVSEGLVFTPGTTASRPTAEAGLMRFNTDVASWEGYDGFSWGAIGGGATVTPTPPSNANEGDIWFDNDEGRTYIYYNDGDSNQWVEMNPSLNGGVANGAISTPQLADGAVTDVKILDLNVTNSKLATNSVSTTKIVDGSVTPAKLDRAYLEDAPTDGNSYVRRSGTWEPSISGASANSTFPTATAIGQQHYNTNDGRLYIVIEDAGSNLIWVDASPDSENALVFSGVNPPNSPENGNLWWDSELGRLFVYYVDDNGDGQWVEASPQVTGFTYDEGTDTWETGSNLGVDGELLIGTDNTTDNLRLNAKMAIVNSGSGSTSHTGLMMTNYSSSSGVAPFLDFNKSRSDTDGGKTAVQAEDSLGFIVFRGTDGDEFHQAASIEAYVDGTTGNNDLPGRLVFKTTADGASSPTERWRINAMGVLESTGANQASWNIICSRPSGPNQGHIRFFNGSSEVGFIATSTTATTYSTSSDYRLKENVAPFTGGIARLQQLKPCRFNFIADPSAVVDGFIAHEAQAVVPEAVTGEKDAVDDKGNPVYQGIDQSKLVPLLTAALQEAVAKIETLEARLNTLEEGLN
Physico‐chemical
properties
protein length:992 AA
molecular weight: 104209,02900 Da
isoelectric point:4,29097
aromaticity:0,08569
hydropathy:-0,28256

Domains

Domains [InterPro]
DC_1386
STR
11–215
DC_1386 DC_1342 DC_1367
G3DSA:1.20.5.320
STR
496–588
G3DSA:1.20.5.320 IPR030392 Coil
IPR030392
CHP
887–984
IPR030392
QIN96917.1
1 992
Architecture
STR
ATT
RBD
STR 11-215 | ATT 252-588 | RBD 680-992
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QIN96917.1
1 992
Domain Start End Length (AA) Confidence
N-terminal 1 299 299 0,1897
Central domain 300 560 262 0,1907
C-terminal 561 992 431 0,7427
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-299
Central
300-560
C-terminal
561-992

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-H34
[NCBI] 		2718942 Uroviricota > Caudoviricetes > Pantevenvirales > Makaravirus > Makaravirus thirtyfour
Host Synechococcus sp. MW02
[NCBI] 		1620844 Cyanobacteriota > Cyanophyceae > Synechococcales > Synechococcaceae > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIN96917.1 [NCBI]
Genbank nucleotide accession
MT162467.2 [NCBI]
CDS location
range 40016 -> 42994
strand -
CDS
ATGGCTGATATCAACATCAGTGAACTTCCACTAATTAGTCTGGCGACTAACGATGACGTCTTTATTATTAATGACGCCAACGCTACTACCAGCCAGATTACTTGGAGTCAACTGCAGAACTCTATTCAACAGCTGACTGGGCAGGTTACTTTTTCCCAGGGAACTGCTACTGAACCTTCGATCACCTTCACCGGTGACCTAAACCTTGGTATCTTCAGTCCTGGTCTGGACACCCTTGGCTTCAGCACGAACGGTGCTGAGCGCATGCGTATTGACCCATCGGGTAACGTAGCGATCGGCTTGTCCGCACCCTCAAACTTCAACGCCGCCGCTAATAACCTCGTTGTCGGTAACACAGCCTCGTCCGACAATGGTATCACCGTTGTAGCCTCTACTGCCGACACCGGCAACCTGTATTTCGCTGATGGTACGGGTGCTGGTTCGGAAGACGCCGGTCAGATCACTTACGACCATAGCGACAACCACCTGCACTTCTCCACGGCAGCCAGTGAGAGAATGCGTATCAACGCAATTGGCAATGTCGGTATCGGTACCAGTGCTATCAAGAGCAACCTTCACGTTCGTGGTGGTGACTCTGGCGTAACTACAACTCCCTCTAACCAATCTGGTATTATTATCGAAAGTGGCGCTGCTGAGTCCGGTGCCCTTCAGTTCTTCAACGCACCCGGAACTAACGCCTACATCAACTTCGGTGACAGTGGTGCTCTTGACGCTGGTTATATCCGCTACGACCACAGCGACAACTCCCTCCGCGTTCAGACCCTCGGTGCCGAGAAAGTTCACCTGACCTCCGCTGGTGATGTTGCTATCGGTACAGGTGCCCCTAACGCCACCGTTCTGGATGTAAACAAGCAAGCAACCGGCGGCACTAGCTACACCGGTATCAAGTCTGCTTCCGAGATTCAGAGTGATGTAACTCTGGACTATCGTTATTTCCGTTCTACTGCTTCCACCCAGGACGCAACTTTCAACCTTACCAACCTCTACCACTTCTCTGCAACTCAGGGAACTATTGGTGGAACTGCTTCTATTGACAACCAGTATGGTTTCGCTGTTGACTCCGGTATGTCCGGTGGCACCAACAACTATGGTTTCTACTCTGGTCTGAACCAGGCAGCAAACACTTACGGTTTCTATGCTGCTGGTACTGCCGACCACTACTTCAACGGTGACAACTTTATTATTGCCAACGGTGGCACCGAAGTCGCTCGTGCCGTAGATACTCTCTTCAAGGTTTCCGAAGGTCTGGTATTCACTCCTGGAACTACTGCTTCCCGCCCAACGGCAGAAGCAGGTTTGATGCGTTTCAACACCGACGTTGCTTCCTGGGAAGGATATGACGGTTTCTCTTGGGGTGCTATCGGTGGTGGTGCTACTGTAACCCCAACTCCACCAAGTAACGCCAACGAGGGTGATATCTGGTTTGATAACGACGAGGGTCGCACCTACATCTATTATAATGACGGCGACTCCAACCAGTGGGTTGAGATGAACCCCTCACTGAATGGTGGTGTTGCCAACGGCGCAATCTCCACTCCTCAGTTGGCAGACGGGGCAGTCACCGATGTCAAGATTCTCGATCTGAATGTAACCAACTCTAAGTTGGCTACCAACTCAGTCTCCACTACTAAAATTGTTGACGGATCCGTAACCCCAGCCAAGCTGGACCGTGCTTATCTGGAAGACGCTCCTACTGACGGTAACTCCTATGTCCGTCGTTCTGGAACCTGGGAACCTTCTATCTCTGGCGCTTCGGCAAACAGCACTTTCCCAACTGCTACCGCTATCGGTCAGCAGCACTACAACACCAACGACGGTCGTCTTTATATTGTTATTGAAGACGCTGGTTCTAACCTTATCTGGGTTGACGCTTCTCCCGACAGTGAGAACGCCCTGGTCTTCTCTGGTGTGAACCCACCCAACAGCCCTGAGAACGGAAACCTGTGGTGGGACTCCGAGCTGGGTCGTCTGTTCGTTTATTATGTTGACGACAACGGTGACGGTCAGTGGGTTGAAGCTTCTCCTCAAGTTACTGGTTTCACTTATGACGAAGGAACCGACACCTGGGAGACTGGTAGTAACCTTGGCGTCGATGGTGAGTTGTTGATTGGTACAGACAATACGACAGACAATCTGAGGCTCAATGCCAAAATGGCAATTGTTAACTCGGGGTCAGGTTCGACTTCACATACTGGTCTAATGATGACCAACTACTCCAGTTCCTCTGGAGTTGCACCTTTCTTGGATTTCAACAAGTCGAGAAGTGACACAGATGGAGGCAAAACTGCCGTTCAAGCCGAAGATTCTTTGGGCTTTATTGTCTTCCGTGGAACTGACGGAGATGAATTCCACCAAGCCGCTTCAATTGAGGCCTATGTCGACGGCACAACTGGAAATAACGATCTGCCCGGCCGATTGGTTTTCAAAACCACCGCTGACGGCGCAAGCAGCCCAACAGAAAGATGGCGTATCAACGCTATGGGGGTATTGGAATCAACTGGTGCAAATCAGGCGTCTTGGAACATAATTTGTTCCAGACCTAGTGGACCTAACCAAGGTCACATCCGGTTCTTCAATGGTAGTTCGGAGGTCGGATTTATTGCAACCAGTACAACAGCCACAACATACTCGACCTCTTCTGACTACCGCCTTAAAGAGAACGTCGCCCCATTCACTGGCGGTATCGCCCGCCTGCAGCAACTAAAACCTTGTCGCTTTAATTTCATCGCTGATCCCAGCGCTGTTGTTGACGGTTTTATCGCACACGAAGCACAGGCTGTCGTTCCTGAGGCTGTGACTGGGGAGAAAGACGCAGTCGATGACAAAGGCAATCCCGTTTACCAAGGCATTGACCAATCCAAATTGGTCCCCTTGCTGACAGCTGCTCTACAAGAGGCAGTTGCTAAGATTGAGACCCTCGAGGCTCGCCTAAATACCTTGGAAGAAGGACTGAACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
c85c9b6eb3c8eeed11aac097afcfa6a2707e0aec8800cf483903619e6ed47ea2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6525
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Isolation and Genome Sequence of a Novel Cyanophage S-H34 from the Huanghai Sea, China Jiang,T. 2019-04-04 — GenBank