Protein

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Genbank accession
UFK09603.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MYPEDKLSSQAAPGSFLFRTRGLLSPMIDYERGGVALRDPSQGLSVKDWKVYIDGNAIYITDSINPAIQAFAMEGVTEVCLAFDANMNPFVGFVVDGVAMIWWYDSSIPEQIFSIIGEGVSNVRSSLDDNRSIASSYRDIILAYNRNGNLYIRKQRDRYEIEYLQAENTPKLDAVGMNSGFRFQFRYQPLDPFPFMYEWDSYIRYSTGDLCVNASLAEVELLSAYMYVYPTTEINQIVNNCGLEMVSPEAAVASFAIGLSADNPSENGWIEMLPYNTDRTLAFTVKTNISETYFSDNQLINGSYSYLLVANTHVVFPRDKEEDMTFRGLITVEV
Physico‐chemical
properties
protein length:334 AA
molecular weight: 37721,01500 Da
isoelectric point:4,39965
aromaticity:0,12874
hydropathy:-0,13653

Domains

Domains [InterPro]
SSF101898
RBD
37–153
SSF101898
UFK09603.1
1 334
Architecture
RBD
RBD 37-153 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UFK09603.1
1 334
Domain Start End Length (AA) Confidence
N-terminal 1 28 28 0,7982
Central domain 29 323 296 0,7326
C-terminal 324 334 10 0,1459
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-28
Central
29-323
C-terminal
324-334

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage DES1
[NCBI] 		2894399 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Xanthomonas sp.
[NCBI] 		29446 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UFK09603.1 [NCBI]
Genbank nucleotide accession
OK624832.1 [NCBI]
CDS location
range 45269 -> 46273
strand +
CDS
ATGTACCCTGAGGATAAGCTTTCGTCACAAGCAGCGCCCGGAAGCTTTCTTTTCAGAACAAGAGGGCTGCTAAGCCCTATGATAGACTATGAAAGAGGAGGAGTCGCTTTGCGCGATCCTTCTCAGGGACTATCTGTTAAGGATTGGAAAGTATACATTGATGGAAATGCTATTTATATAACGGATAGTATCAATCCTGCTATACAGGCGTTTGCTATGGAAGGAGTAACAGAGGTATGTTTAGCGTTTGATGCTAATATGAATCCTTTCGTAGGATTTGTTGTAGATGGCGTAGCTATGATTTGGTGGTATGATAGCTCAATTCCAGAACAGATATTCAGTATTATAGGAGAGGGCGTTTCTAATGTCCGCTCATCCTTAGATGATAATCGTAGCATTGCCTCTTCTTATAGGGATATTATCTTAGCCTACAATAGAAACGGAAATCTATATATTAGAAAACAAAGAGATAGATATGAGATTGAATACCTACAGGCAGAAAACACACCTAAGTTAGACGCAGTGGGTATGAATAGCGGGTTTCGCTTTCAGTTTAGATATCAACCGTTAGATCCATTTCCTTTTATGTATGAGTGGGATAGTTATATTAGATACAGCACAGGGGATTTATGTGTGAATGCCTCCTTGGCAGAAGTGGAGCTTCTTTCAGCTTATATGTATGTTTATCCTACAACTGAAATTAATCAGATTGTAAATAACTGTGGATTAGAGATGGTGTCACCTGAAGCTGCTGTAGCATCTTTTGCCATAGGATTGTCTGCTGATAATCCATCAGAAAATGGGTGGATAGAGATGCTCCCATATAATACAGATAGGACTTTAGCTTTTACTGTTAAAACCAATATCTCTGAAACATACTTTTCAGACAATCAATTAATAAATGGATCTTACTCATATCTACTTGTAGCCAATACACACGTTGTATTTCCCAGAGATAAAGAAGAAGACATGACTTTTCGTGGACTTATTACAGTAGAGGTGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
6e562d4787380729ce3d43af481598910b9874ad9618afece96ac5ec4e1c022a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4895
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50