Protein

View in Explore
Genbank accession
VFR12406.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MNERGRQQPDIIQTGAQGLFPPPIVAWDGDDLTVLNSRSYTFTNVTGAIPVVTLSDSKIQILPQPGETNGTPVNQHICSWLFTDAGGLPITTDGVPCTFTFVAAVSSSALETAPEVLLPSPHTVHHKQHSLPAVDGFFYNVEAEGTDVNIDENVPGTPGVETTFNVHVAPWEATPAFSPTSTNLMVVVQSKFVVTADENGEAASLGMEWVGIPAFTQANKSGAFWKHPTTIATAQRRGKAMVSKRFEGLKTLPLSIDATKGYLDSQLLYTVSDVGRDAATGRLAPLRKEAMGPLGAVKQLLEHAAVENKHDVEGYVKTGSSRVVETNVEHAKRTPKYVMDVIQHPDTETELYIAFPTNHQNRTFYLHAKVENGDLRFGSSTYKLPTWYIDLSAVVIAGVETAEGWLVYVTEEVIAMSSSDFVAAPNFSGPTESAHRDQVMLHNSSLDYVYCGGAPHGIGRMAPSHTPVSPAYLGALNYGVGLTLSNGTWTRSSGTQFGLYLPHTLTLRQIGDLGEITGGKTRRPGQPTLVSVDILALFDFYNNLDYGLNYATLIYYFTLKPTISNGQVTFPAAPLTLAQVACMRTVNNVNVLDANNAGKALFSIWFIGIGTATIIDGAPAGAANGYASEFILATIHADRLTLSQAEWDKMKQMNGWYCTGPETFPYHNVSGTFYENLSQMCHIVTPASPGTELYSGKAGYGPTNNRRVVDSTTWLSQPRTRLAIEVEFDPNTTSIYELGMAYPLTLGANSRLICDYNFTARSFSAVMLNQGRGMPYVTITTLDDGVSWYEYLSFATSQDKYIVSQGHAGDRDLGAEIGIPSRKWGEGQANNRTLEGADRFPIVADLTTVRYNGINFKQWVSSFVVDCSSMTITLNFRVGLTPTVWFASTTGQTNSARNFVHGPECNHAIGVDGDTDVLVAPVTQIYADASAKWTGGMLTSGDNIYLRQGQKRSSIALDELNLGGSNTFVADVLERVYLLRTVLTSGDYFVSMRVITTAPWVVDPSTNDLIVCNKHHRVVKVQLGDYRNGNAAGCLGSDGAYYLVIFDGTIDHASAYPGVNLVAIVITGTDAMIPSNTLENMQQTSVRYRPAGMGSNGNPPGDWAIYYAYADVSQTWQKGLARYESGKVYSLRNGNNNFLPIPVQGNYEGYTKNTLNDKIGTLLPAWTVGGSSYTTSDKMVTSRQGFLLEQKIDNVPYASTSVTGLAKLWDAIDRTVLSGKALTTHTHTIADLDFGIEKMDNTGPLEKPVTNALGKGFVLDANGQMHLTLTAADAVTDLKNKLDGYVDDTYTVNLFAITNLSASAAASTAISQKETNKVYMNAELPAATTTVQGLPANAYFKSSDTLKIYGSGKNSVYLVTPDMVKMYLTSVKISGKAGDKWGAYDAGVLAPVYNNEPGIATEFSAGLNTLWVHKGEKFIITSTKPLVLKADQDRVLNNDAITFQTTSGHVISMQQKHVDMLLDNTLGDLLGRMTKAFGRTLAELVTLMSTSGIHGYTCGDIGALPVLGKAVDAQNGKQVFDDEMYQHHLIKNAILERAHELDEAFAEVTDLIYLEEAILRDEIVKALEDIRLGDWSELMKYPPIISPIDPPKDPASEIGKYLVKTDMKDPRNCLLNATEVEYELLSVGRQYRIGHYFQELAEAENDAIYGSIMVTDKTTGTKRKLIEGLDYFLRYSTVIPVEAPFYRIGLTLTMPREDAAQFNGTLSTATYPNTALPLLGGRSPFYYRLGVFAQLG
Physico‐chemical
properties
protein length:1736 AA
molecular weight: 188968,05940 Da
isoelectric point:5,39774
aromaticity:0,09274
hydropathy:-0,14919

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
VFR12406.1
1 1736
Domain Start End Length (AA) Confidence
N-terminal 1 126 126 0,6361
Central domain 127 325 200 0,7694
C-terminal 326 1736 1410 0,2627
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-126
Central
127-325
C-terminal
326-1736

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SPFM10
[NCBI] 		2528680 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
VFR12406.1 [NCBI]
Genbank nucleotide accession
LR535908 [NCBI]
CDS location
range 93148 -> 98358
strand -
CDS
GTGAACGAGAGAGGACGTCAACAGCCTGATATTATCCAGACGGGCGCTCAGGGTTTATTCCCACCACCGATCGTGGCGTGGGATGGCGATGATCTTACGGTTCTGAACAGTCGTAGCTACACGTTTACGAATGTGACAGGTGCAATCCCGGTTGTTACCCTTTCGGATAGTAAGATTCAAATCTTACCACAGCCGGGAGAGACCAACGGCACACCAGTTAACCAGCATATTTGCTCTTGGCTTTTCACTGACGCTGGGGGACTACCAATCACCACCGATGGCGTGCCGTGCACCTTTACATTTGTCGCGGCGGTAAGTTCTTCAGCGCTCGAAACAGCTCCAGAAGTGTTATTGCCGTCACCACATACCGTGCACCACAAACAGCACTCTCTGCCAGCAGTGGATGGCTTTTTCTACAACGTCGAGGCGGAAGGTACGGATGTTAACATTGACGAAAATGTCCCAGGTACACCGGGAGTAGAAACGACCTTTAATGTCCACGTTGCCCCATGGGAGGCGACGCCCGCTTTCTCACCGACCTCAACGAACTTGATGGTGGTGGTGCAAAGTAAATTCGTCGTAACGGCTGATGAGAACGGTGAAGCGGCATCGTTGGGAATGGAGTGGGTAGGTATTCCAGCGTTTACTCAGGCAAACAAATCGGGGGCGTTTTGGAAACATCCTACAACAATCGCGACGGCACAGCGTCGCGGTAAAGCGATGGTGTCCAAACGTTTCGAAGGCTTGAAAACTTTGCCGTTGTCGATCGATGCTACGAAAGGCTATCTGGATAGTCAGTTGCTTTATACCGTATCTGACGTGGGAAGGGATGCAGCAACGGGCAGACTGGCACCATTGCGTAAAGAAGCGATGGGTCCTTTGGGGGCGGTGAAACAACTGTTGGAACATGCGGCGGTTGAGAATAAGCATGATGTGGAAGGGTATGTTAAAACGGGCTCGTCGCGAGTCGTCGAGACTAACGTCGAACATGCTAAGCGAACACCGAAGTACGTAATGGACGTGATTCAACATCCAGACACTGAAACGGAACTCTATATCGCATTTCCAACAAACCATCAGAACCGGACATTCTACCTGCACGCCAAGGTAGAAAATGGTGACCTGCGTTTCGGCTCGAGCACTTATAAGCTGCCTACGTGGTATATTGACCTCAGCGCAGTCGTCATTGCTGGTGTGGAAACAGCCGAAGGTTGGCTGGTATATGTGACTGAGGAAGTTATCGCAATGTCGTCGAGTGATTTTGTCGCGGCTCCTAATTTTAGTGGCCCGACTGAATCGGCTCATCGTGATCAGGTGATGCTACACAACTCATCTCTCGACTACGTCTATTGTGGTGGTGCTCCACACGGCATTGGACGCATGGCACCATCCCACACTCCAGTCAGCCCAGCTTATCTGGGTGCGCTTAACTACGGTGTTGGTCTTACGCTGTCTAACGGTACCTGGACGCGTTCTTCTGGTACTCAGTTCGGGTTGTATCTTCCACACACGTTAACCTTGCGCCAAATTGGCGACTTGGGCGAGATAACGGGAGGAAAAACACGCCGGCCGGGACAACCTACACTGGTGTCAGTAGATATATTGGCACTGTTTGACTTCTATAACAACCTCGACTACGGCTTGAACTATGCTACGTTGATCTACTACTTTACACTGAAACCAACGATCAGCAACGGGCAGGTAACATTCCCCGCAGCGCCGCTCACGTTAGCACAAGTAGCATGTATGCGTACTGTGAACAATGTTAACGTGTTGGATGCAAATAACGCCGGAAAGGCACTGTTCTCCATTTGGTTCATCGGCATTGGTACGGCCACAATCATCGACGGTGCACCGGCTGGCGCTGCGAATGGTTATGCTTCGGAATTTATCCTTGCCACGATTCATGCCGATCGGTTGACGCTGTCACAAGCCGAATGGGATAAGATGAAGCAGATGAACGGCTGGTATTGCACAGGACCAGAAACATTCCCTTACCACAACGTTTCTGGCACTTTCTACGAGAATCTGTCGCAGATGTGCCACATTGTTACACCGGCGTCGCCTGGTACAGAGTTATATTCAGGTAAAGCGGGGTATGGACCAACTAACAATCGTCGTGTAGTAGATTCTACCACGTGGTTGTCACAGCCGCGTACCCGTTTGGCAATTGAAGTTGAGTTTGATCCGAACACCACTTCTATCTACGAGCTGGGCATGGCGTATCCGCTGACTCTGGGAGCGAATTCCAGACTTATCTGCGACTACAACTTCACTGCCAGAAGTTTTAGTGCGGTAATGTTAAACCAAGGTCGTGGTATGCCTTATGTCACGATTACAACGTTAGATGACGGTGTGAGTTGGTACGAGTACCTGTCGTTTGCAACATCGCAAGACAAGTATATCGTTTCGCAAGGACATGCAGGCGATCGCGACCTAGGCGCTGAGATTGGGATTCCGAGCCGGAAATGGGGCGAAGGTCAAGCTAATAACCGAACCCTGGAAGGTGCTGATCGATTCCCTATTGTGGCCGATCTTACCACGGTTCGTTATAACGGTATTAACTTTAAACAATGGGTGTCAAGCTTTGTTGTTGATTGTAGTTCAATGACGATAACGCTGAACTTTCGTGTTGGTTTAACTCCAACGGTTTGGTTTGCTTCTACTACAGGGCAAACTAATAGTGCGCGAAATTTCGTCCATGGTCCGGAATGTAATCACGCGATTGGTGTGGATGGGGATACAGATGTGTTGGTAGCGCCAGTAACACAAATCTACGCAGACGCATCGGCGAAGTGGACAGGTGGGATGTTAACGTCGGGAGATAATATCTACTTGCGTCAGGGTCAGAAACGTTCTAGCATCGCACTCGACGAACTTAATCTGGGTGGTAGCAACACGTTTGTGGCGGATGTGTTAGAGCGGGTTTATCTGCTCCGTACTGTGCTTACCTCCGGTGACTATTTCGTGAGTATGCGTGTGATTACAACCGCTCCATGGGTTGTTGATCCATCAACAAACGATTTGATCGTTTGCAACAAACATCATCGTGTTGTTAAAGTTCAGTTGGGCGATTACCGAAATGGTAACGCGGCCGGTTGCTTAGGCAGTGACGGTGCGTACTACCTGGTCATCTTTGACGGCACCATTGACCATGCATCGGCGTATCCTGGGGTGAATCTGGTTGCTATTGTGATTACCGGTACAGATGCAATGATCCCAAGCAATACGCTGGAAAATATGCAGCAGACGTCCGTACGTTATCGACCCGCTGGAATGGGTTCTAACGGGAATCCACCAGGTGACTGGGCTATCTATTACGCCTATGCTGATGTGTCGCAAACCTGGCAGAAAGGTTTGGCGCGTTACGAGTCTGGTAAGGTTTACTCGCTCCGTAACGGCAACAATAACTTCTTGCCTATACCAGTCCAGGGGAACTACGAAGGGTATACCAAAAACACACTGAATGACAAGATTGGTACGTTATTACCGGCGTGGACTGTCGGCGGATCATCGTACACTACCTCGGATAAGATGGTCACTTCGCGTCAGGGCTTCTTGCTTGAACAAAAGATTGACAACGTGCCGTACGCATCCACGTCTGTTACAGGTTTGGCTAAACTGTGGGATGCAATCGACCGTACCGTGCTATCAGGCAAAGCGCTTACAACGCACACCCACACCATTGCAGATCTCGATTTCGGTATTGAGAAAATGGACAATACCGGACCGTTAGAAAAGCCAGTTACTAACGCATTGGGTAAAGGGTTTGTGTTAGACGCAAACGGGCAGATGCATCTGACCTTAACCGCGGCAGATGCTGTTACTGACTTGAAGAACAAACTCGACGGATATGTGGACGACACGTATACGGTCAATTTGTTTGCGATTACTAACCTCTCGGCATCCGCTGCAGCGTCCACAGCGATTTCCCAAAAAGAAACAAACAAAGTTTACATGAATGCGGAGCTGCCTGCAGCAACCACAACTGTGCAGGGTCTTCCAGCAAACGCCTACTTCAAGTCCAGCGACACGTTGAAGATTTACGGCTCTGGTAAAAACAGCGTGTATCTCGTTACACCGGATATGGTTAAGATGTACTTGACCTCGGTGAAGATATCGGGTAAAGCAGGTGACAAGTGGGGCGCTTATGATGCAGGTGTGCTTGCACCTGTGTATAACAACGAACCGGGTATCGCTACGGAGTTCAGTGCTGGTCTGAACACGCTTTGGGTTCACAAAGGTGAGAAGTTCATTATCACCTCGACAAAACCGCTGGTATTAAAAGCTGACCAGGATCGTGTTCTGAATAACGACGCAATTACATTCCAAACAACGTCCGGTCACGTTATCAGCATGCAACAGAAACATGTTGACATGCTTCTGGATAATACCCTGGGTGATTTACTGGGCCGTATGACTAAAGCGTTTGGACGTACACTGGCAGAGTTAGTGACGCTAATGTCTACCAGCGGTATCCATGGTTACACCTGCGGTGACATTGGCGCACTCCCTGTGCTCGGTAAGGCCGTGGATGCGCAGAACGGTAAACAGGTGTTTGATGACGAAATGTATCAACACCACCTGATTAAAAATGCAATTTTAGAGCGCGCCCACGAACTAGATGAGGCATTTGCCGAAGTTACCGATTTGATTTATCTCGAAGAAGCGATTCTTCGCGATGAAATCGTAAAGGCGTTGGAAGATATCCGTCTGGGTGATTGGTCTGAGCTGATGAAATATCCGCCGATTATTTCGCCAATCGACCCGCCAAAAGATCCTGCTTCTGAAATCGGCAAGTATCTGGTTAAGACGGATATGAAAGACCCGCGCAACTGCCTGCTGAACGCCACAGAGGTAGAATACGAGTTGTTGTCGGTTGGTCGACAGTATCGCATCGGACATTACTTCCAGGAATTAGCCGAGGCTGAGAACGATGCAATATACGGCAGCATAATGGTTACCGATAAAACAACCGGAACCAAACGTAAGTTAATAGAAGGTCTTGATTATTTCTTACGTTATTCGACGGTCATTCCCGTCGAAGCACCGTTCTATCGCATCGGGTTAACGTTAACAATGCCGAGAGAAGATGCGGCGCAGTTTAACGGTACCCTCAGTACCGCTACTTACCCGAACACCGCCCTTCCGTTATTGGGAGGGCGGTCTCCGTTTTATTACAGATTAGGAGTGTTTGCACAACTCGGGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
e63095833e55b296a577a03523a993d6aa35391a757a9c80743a013931b25624
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2497
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50