Protein

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Genbank accession
QBQ72450.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAKLAKFLQGVAGAGGAALNVEDVFSTYLYEGNGSTQTITNGIDLSGEGGLVWGINRTTAFGHVLATTEFSAPNYLKSHSTGLLNTTASSVTSFNSDGFDVGSLGDINYNGHDFVSWTFRKAPKFFDVVTYTGNGTAGRTVSHNLGSVPGMMIIKRTDSGAAWYVYHREMSNTDTLRLNTNAAKSTNQANFLNSTTPTDTEFTLGSEADVNGSGGTFIAYLFAHNDGDGDFGPDGDADIIKCGSLTTDGSGYATADLGFEPQFVLVKSTTRTEDWHLLDTMRGLGSTGLSNKRLRANGSNSEDTLGADYFIIDATSFKINAWMTNHTYIYIAIRRGPMAVPESATDVFAVDQENSSAPYYTSNFPVDMGFIRRKDNTSSWYIYDRLRQGRELVINTTAAEGGAGNAQFDYMDGFSEGAFASDVYSWMWKRAPSYFDVVAYSGTGSARNLSHNLGVAPEMMWIKPRDLSYQWSVYHKDVSSSSPYYELKLNSTDALANSGNTNAPFAGNPTATTIPLPSGTASASNRSGYNYIAYLFASVAGVSKVGSYTGNGSTQNIDCGFSSGARFVLIKRTDNSSDWFVFDSERGINAGTEPRLELNNTDAEPTATDQIDPYSAGFNLASQSSFNINISGASYIFYAIA
Physico‐chemical
properties
protein length:641 AA
molecular weight: 69021,90520 Da
isoelectric point:4,85925
aromaticity:0,12012
hydropathy:-0,30374

Domains

Domains [InterPro]
IPR055906
STR
23–334
IPR055906 DC_2192 IPR055906
IPR055906
STR
433–641
IPR055906
QBQ72450.1
1 641
Architecture
STR
STR 23-641
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QBQ72450.1
1 641
Domain Start End Length (AA) Confidence
N-terminal 1 13 13 0,7927
Central domain 14 212 200 0,0020
C-terminal 213 641 428 0,9971
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-13
Central
14-212
C-terminal
213-641

Taxonomy

  Name Taxonomy ID Lineage
Phage Roseobacter phage CRP-1
[NCBI] 		2559280 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Rhodobacteraceae bacterium
[NCBI] 		1904441 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Rhodobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBQ72450.1 [NCBI]
Genbank nucleotide accession
MK613343.1 [NCBI]
CDS location
range 31140 -> 33065
strand -
CDS
ATGGCAAAACTAGCTAAGTTCTTACAGGGTGTTGCGGGTGCTGGTGGTGCTGCCCTGAATGTTGAGGATGTGTTCAGCACTTATTTGTATGAGGGCAATGGCTCTACACAAACGATCACTAATGGTATTGACCTTAGTGGCGAAGGTGGGTTGGTTTGGGGTATAAACAGAACCACTGCATTCGGTCACGTTCTTGCAACCACAGAGTTTTCAGCACCTAATTACTTAAAATCACACAGCACTGGTCTTCTTAATACTACTGCTTCATCAGTGACTTCCTTTAATTCAGATGGTTTTGATGTAGGATCGCTAGGTGATATAAATTATAATGGGCATGATTTCGTTTCTTGGACATTCCGCAAAGCCCCTAAGTTTTTTGATGTGGTGACTTATACTGGGAATGGGACTGCGGGTAGGACTGTTAGTCATAACCTTGGTTCTGTGCCGGGAATGATGATTATAAAAAGAACTGATAGTGGTGCGGCTTGGTATGTGTACCACAGAGAAATGTCGAATACCGACACTTTAAGATTGAATACAAATGCCGCTAAATCCACAAATCAGGCTAATTTTCTAAACAGTACAACCCCTACGGACACCGAATTTACTTTAGGTAGCGAAGCTGATGTCAATGGGTCTGGGGGAACTTTTATTGCCTACTTATTCGCTCACAACGATGGTGACGGTGACTTCGGCCCTGATGGTGATGCTGATATTATCAAGTGTGGGAGTTTAACAACTGATGGCAGCGGGTATGCTACGGCTGATTTAGGGTTTGAACCACAATTTGTCCTTGTAAAAAGCACCACTAGAACTGAAGATTGGCATTTATTAGATACTATGAGAGGCTTAGGGTCTACTGGTCTCAGTAATAAACGTCTAAGAGCAAATGGTAGTAATAGTGAAGATACTCTGGGTGCTGATTATTTTATAATAGATGCAACAAGTTTTAAAATAAACGCTTGGATGACAAACCACACCTACATCTACATAGCCATACGCCGTGGCCCAATGGCGGTGCCTGAGAGTGCGACTGATGTGTTTGCTGTTGATCAAGAAAATTCATCTGCTCCATACTATACATCAAACTTTCCTGTTGATATGGGATTTATTAGAAGAAAAGATAATACAAGTTCGTGGTATATTTATGACAGACTACGACAAGGTAGAGAACTTGTTATAAACACTACTGCTGCTGAAGGCGGTGCTGGCAATGCACAGTTTGACTATATGGATGGTTTTTCAGAAGGTGCATTTGCATCAGATGTTTACTCATGGATGTGGAAACGTGCACCTAGCTATTTCGATGTGGTTGCTTACAGCGGCACAGGAAGCGCAAGAAATTTAAGTCATAATCTTGGTGTTGCACCTGAAATGATGTGGATAAAACCTAGGGATTTATCATATCAATGGAGTGTTTATCATAAAGATGTAAGCAGCAGTTCGCCATATTACGAGTTAAAATTAAACAGTACTGATGCATTAGCAAATAGTGGTAATACAAACGCACCATTTGCAGGTAATCCAACAGCTACTACTATTCCACTTCCAAGCGGTACAGCATCTGCTTCAAATAGAAGTGGATATAACTACATAGCCTACCTTTTCGCTTCCGTAGCAGGTGTATCCAAGGTGGGGAGTTATACTGGGAATGGCTCTACGCAGAACATTGACTGTGGGTTCTCTAGTGGGGCTAGGTTTGTACTGATTAAGAGAACAGATAACTCAAGTGACTGGTTTGTATTTGACAGTGAGAGAGGGATTAACGCTGGCACAGAGCCACGATTAGAACTCAATAACACAGATGCAGAACCTACAGCAACAGATCAAATTGACCCGTACTCTGCTGGCTTTAACCTAGCCTCACAAAGTTCGTTTAATATCAATATATCAGGTGCATCATACATCTTCTACGCAATCGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
35482d2d09d38daba0456e265c5bb251c162494d79ea22209410669fead9351f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8598
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Diverse, abundant and novel viruses infecting the marine abundant Roseobacter RCA lineage Zhang,Z.F., Chen,F., Chu,X., Zhang,H., Luo,H.W., Zhai,Z.Q., Yang,M.Y. and Zhao,Y.L. 2019 — GenBank