Protein

View in Explore
Genbank accession
XFD46825.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MAFSWQEQIKPAGTQDIQCDIEYLDKSYIHVYLDGVETTGYTWTSSTNIRLNSALEASTTVLLIRKTEREYLYIEFASGSPFIEVNVDSQNTQFLHLAQELVEGRAIPGFYGDISMNGYRITNVADPTDPQDAATKNYVDTGDARLDSRIDSEHSAWVSAVQAEAATRQAADDALSARTSALENTFISGVETVSYPWSTVLTEDTDEVTPGLAFTKAVVEINGVGQIRGYSFEIVDNTILFAEPLPAGTIVAARLGVDVTAGDGFATQASVDYLADSLGDLAYLDKAAAVADATSIGDVVTQLNALLAVLRTSGVLGT
Physico‐chemical
properties
protein length:318 AA
molecular weight: 34149,37230 Da
isoelectric point:4,16291
aromaticity:0,08491
hydropathy:-0,02233

Domains

Domains [InterPro]
DC_1609
STR
1–317
DC_1609
IPR005604
ATT
14–103
IPR005604
XFD46825.1
1 318
Architecture
STR
ATT
STR
STR 1-13 | ATT 14-103 | STR 104-317 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_KpP_AttikonH1
[NCBI] 		3234956 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XFD46825.1 [NCBI]
Genbank nucleotide accession
PP974225.1 [NCBI]
CDS location
range 36325 -> 37281
strand +
CDS
ATGGCATTCAGCTGGCAAGAGCAAATCAAGCCAGCTGGTACCCAGGATATCCAGTGTGATATTGAGTATTTGGACAAGTCCTATATTCATGTATATCTCGACGGCGTTGAAACCACTGGATACACTTGGACCAGCTCCACTAATATAAGACTGAATTCAGCCTTGGAAGCAAGCACTACTGTGCTGCTAATCCGTAAGACTGAACGCGAGTATCTGTACATTGAGTTTGCTAGCGGCTCTCCGTTCATTGAGGTGAATGTTGACTCCCAAAACACTCAGTTCTTGCACCTGGCGCAAGAGCTGGTGGAGGGTAGGGCTATCCCCGGATTCTACGGGGATATAAGCATGAACGGGTACCGCATCACTAACGTAGCGGACCCGACAGACCCCCAGGATGCCGCGACCAAGAACTATGTAGATACTGGAGATGCTCGGCTGGACTCGCGTATCGACTCAGAGCACTCCGCCTGGGTATCCGCCGTGCAGGCAGAGGCCGCTACTAGACAAGCTGCAGATGATGCACTGAGCGCCCGTACTTCGGCTTTGGAGAATACCTTTATAAGTGGTGTAGAGACGGTAAGCTACCCGTGGAGCACGGTGCTGACCGAGGATACAGACGAGGTGACTCCTGGCCTAGCATTCACCAAGGCTGTAGTAGAGATTAACGGGGTTGGGCAAATTCGCGGTTACAGCTTCGAGATAGTAGACAACACCATACTATTTGCCGAGCCACTCCCCGCTGGTACCATTGTAGCTGCCAGACTGGGGGTTGACGTAACTGCAGGAGACGGCTTTGCTACACAAGCGTCTGTTGATTACTTAGCCGACTCGTTGGGGGATTTGGCATATCTGGATAAAGCGGCAGCTGTAGCCGACGCAACAAGCATCGGGGATGTAGTAACCCAACTAAATGCCCTGCTGGCAGTACTACGCACCAGCGGGGTGCTAGGAACGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ec7d398738c5aa717709cce6df9098b477701a1d472be54254b995e5d50053ee
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8158
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of lytic bacteriophages against carbapenemase-producing K. pneumoniae clinical isolates Paranos,P., Siopi,M., Skliros,D., Zrelovs,N., Svanberga,K., Kazaks,A., Flemetakis,E. and Meletiadis,J. 2024-12-22 — GenBank