Protein

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Genbank accession
QBQ73553.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MTTRLDLGFDTNHNDPNEYYKSFALSPSAGKVVFCLRDEIVIYGGGGAQERLSIKPFGSLDKNKLVNFYNNYEYRPSSTDPYKGWMKLHTDVYYVPDIRNQDIQSWVSFPGIKANKIICNDVSALTLGERELKGSLLSASGSTRSINLESNPLIKGRVMTSFILLGDVLYIGFRDFDGMVECNLATGAVTSKIEGLNLTNATGNKPNSSNCQLALDTTTNTLYAHTQQGQFQRKLNEKSWREISPAWYNGMVEVIAPGEVIFIANQGTLLYKAKEDRFYPQERLDVGYTRSVAKVGNELITYVRHGGQEPYFTPYFLSTPIQTAPRKEVTNIQELPILQPQDAIKYNGKLYVASKGSGFVEIDGDKAKVISPEPTLAVALRGNVILAVTRSLLISYNPSTAKTEVIKGLGKELNGVRLAASTLYTVIIENVGENGNQFAVYDSNYKEVFRWGESGTYLQDVQISNNEIYVAGFSNRTRQGVPVQVAFLKVFDASKSFQIVRSGWNFDPESLGNDMADARLYRIQLVGDKLYVLGESAGGNSVFRWNGFDLKTQTIAEGVDWFSLGTKTKANHISYTGVLAANTLKVISGQFTLTRTDSMDGNALRAKTLLVNEDSVFVGGMAAYKVQGRDSRKVLGQTLPKYGDVPGDASLLTLSADLNGSRKDWQAIAPADNVIYFDGSVALIEFKGQLKKVDF
Physico‐chemical
properties
protein length:695 AA
molecular weight: 76716,88310 Da
isoelectric point:8,01505
aromaticity:0,10216
hydropathy:-0,25223

Domains

Domains [InterPro]
DC_1324
STR
1–374
DC_1324 SSF75011 DC_1193
QBQ73553.1
1 695
Architecture
STR
RBD
STR 1-561 | RBD 562-695
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QBQ73553.1
1 695
Domain Start End Length (AA) Confidence
N-terminal 1 54 54 0,6194
Central domain 55 385 332 0,6269
C-terminal 386 695 309 0,0256
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-54
Central
55-385
C-terminal
386-695

Taxonomy

  Name Taxonomy ID Lineage
Phage Nodularia phage vB_NspS-kac65v162
[NCBI] 		2557581 Uroviricota > Caudoviricetes > Ravarandavirus >
Host Nodularia spumigena
[NCBI] 		70799 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBQ73553.1 [NCBI]
Genbank nucleotide accession
MK605244 [NCBI]
CDS location
range 73381 -> 75468
strand -
CDS
ATGACTACAAGACTAGATTTAGGCTTCGACACAAACCACAATGACCCAAATGAGTACTACAAATCATTTGCTTTAAGCCCGTCTGCGGGTAAGGTAGTATTTTGTTTGCGTGATGAAATTGTTATTTATGGGGGAGGTGGGGCGCAAGAAAGACTCTCGATCAAACCTTTCGGCTCCTTGGATAAGAACAAACTTGTAAATTTCTACAACAACTACGAGTACCGCCCATCCTCTACCGACCCCTACAAGGGGTGGATGAAATTACATACAGATGTTTATTATGTTCCCGACATTCGTAATCAAGATATTCAGTCTTGGGTTAGCTTCCCTGGGATTAAAGCAAATAAAATAATCTGCAATGACGTTTCTGCGTTAACTCTAGGGGAGAGAGAGTTAAAAGGGAGCTTACTAAGTGCCAGTGGCTCTACCAGAAGCATCAATTTAGAGTCGAATCCCTTAATTAAAGGTCGGGTAATGACCTCGTTTATTCTTCTGGGAGATGTTCTCTATATTGGTTTTAGGGATTTTGATGGTATGGTTGAATGCAACCTAGCTACTGGTGCGGTAACAAGTAAAATTGAGGGTCTAAACCTAACCAATGCTACCGGAAATAAACCCAATTCCTCTAATTGCCAACTTGCTCTGGATACTACCACTAACACACTATACGCTCACACTCAACAGGGTCAGTTTCAGCGCAAACTCAATGAAAAGAGTTGGCGGGAAATCAGCCCCGCTTGGTACAATGGTATGGTTGAAGTTATCGCTCCAGGTGAAGTGATCTTTATCGCCAACCAAGGTACGCTACTGTACAAGGCAAAAGAAGATAGATTCTATCCTCAAGAACGCTTAGACGTTGGATACACTCGCTCTGTTGCGAAAGTAGGTAATGAATTGATTACTTACGTTAGACATGGTGGGCAAGAACCTTACTTCACCCCCTACTTCCTTTCTACTCCCATCCAGACTGCACCCAGAAAAGAAGTAACCAACATCCAAGAGTTACCTATACTGCAACCTCAAGATGCCATTAAATACAACGGTAAACTGTATGTTGCGTCTAAAGGGTCTGGGTTTGTAGAAATTGATGGAGATAAGGCAAAGGTTATCTCGCCTGAACCTACTTTAGCTGTAGCTTTACGCGGTAATGTGATTTTGGCAGTTACTAGAAGCTTACTTATTAGCTATAACCCAAGCACAGCGAAAACAGAGGTAATTAAAGGTTTAGGTAAGGAATTGAACGGTGTAAGGTTAGCTGCAAGTACGCTGTACACAGTAATTATTGAAAATGTTGGCGAAAACGGAAATCAATTTGCAGTTTACGACTCCAACTATAAAGAAGTTTTTAGATGGGGTGAGTCTGGCACATATCTGCAAGATGTCCAAATAAGCAATAATGAAATCTATGTTGCTGGTTTCAGTAACCGCACCCGTCAAGGTGTGCCAGTTCAAGTTGCTTTCTTAAAAGTATTTGATGCTAGCAAAAGTTTCCAAATTGTCCGAAGCGGTTGGAACTTTGATCCCGAATCTCTCGGTAACGATATGGCTGACGCTAGGCTTTACCGTATTCAACTTGTGGGAGACAAGTTATACGTTTTAGGCGAGTCAGCAGGTGGTAATAGCGTTTTCAGATGGAATGGCTTCGATCTGAAAACACAGACTATTGCTGAGGGTGTGGACTGGTTCTCATTGGGAACAAAAACCAAAGCAAATCATATATCTTACACAGGTGTTTTAGCCGCTAATACTTTGAAAGTTATTAGTGGTCAATTTACACTGACTCGCACCGACTCGATGGACGGGAACGCGTTGAGAGCCAAAACCCTGTTAGTGAATGAAGACTCAGTTTTCGTTGGTGGTATGGCAGCTTACAAGGTACAAGGGCGTGACTCTCGCAAAGTGCTAGGGCAAACGCTACCCAAATATGGTGATGTACCTGGAGACGCTTCTTTACTTACCCTGTCAGCAGACCTAAACGGTAGCAGAAAAGATTGGCAAGCGATCGCCCCTGCTGATAACGTGATTTATTTTGACGGCTCTGTTGCCTTGATTGAGTTTAAAGGTCAACTGAAGAAAGTCGATTTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
501bc641e5e920287b626abe29a47e43e01bd5efbde9e860fa9e206ced94dc40
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7448
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Diversity and diversification of Nodularia spumigena cyanophages in the Baltic Sea Sulcius,S., Holmfeldt,K. and Simoliunas,E. — — GenBank