Protein

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Genbank accession
CAB4240987.1 [GenBank]
Protein name
Pectate lyase superfamily protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MSLTKASYSMITGAPVNVKDFGAVGDGVTDDSAAFQAAVATLTSAGGKMIFVPKGVYVTSFELGYGQQIVGESARGSTLLKPPTGATYVITIKATVSARQNCQIRNMTIYNPGAVANCDGIYFNSASVSNINDSHLVENVFISGFRYGIYVTGRQILCRYLGIEVTTCTKGMYVVSDASNYAYNLNYFEQCRFSSCTQEGVKITGYNIANKFVNCNVELNNSSAVAGIAGFYIEDAEGLFLDNPYFELNGSAVTVDTVNPLNNSIGLYLTGARCFNVRVTNGWMVQSGTIIAVNVSSGIIGGEISGIRFAPSSGGFDVYVGDKLNGINGQPIIIDSNNYFSGQLKILSPASGLTAGAVRQTAATQFIAAATTLDLRAANKFSVSNATGFNLVNITNRFPGMTMMVSNIGAGTVTIDASLMSSGVASSLAANVSKQYLVLGYGSIGKFVEI
Physico‐chemical
properties
protein length:450 AA
molecular weight: 47352,11790 Da
isoelectric point:6,59221
aromaticity:0,09778
hydropathy:0,22911

Domains

Domains [InterPro]
IPR012334
STR
12–293
IPR012334
IPR011050
STR
15–311
IPR011050
IPR024535
ENZ
16–82
IPR024535
CAB4240987.1
1 450
Architecture
STR
STR 12-311 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
CAB4240987.1
1 450
Domain Start End Length (AA) Confidence
N-terminal 1 28 28 0,9046
Central domain 29 356 329 0,9916
C-terminal 357 450 93 0,9831
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-28
Central
29-356
C-terminal
357-450

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured Caudovirales phage
[NCBI] 		2100421 Uroviricota > Caudoviricetes > Peduoviridae > Maltschvirus maltsch >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAB4240987.1 [NCBI]
Genbank nucleotide accession
LR797817 [NCBI]
CDS location
range 17265 -> 18617
strand +
CDS
ATGTCTCTAACAAAAGCATCTTATTCAATGATTACTGGCGCACCAGTAAACGTCAAGGATTTTGGCGCAGTAGGTGATGGCGTAACAGATGACAGTGCGGCATTTCAAGCTGCTGTTGCAACTCTAACAAGTGCTGGCGGCAAAATGATATTTGTCCCAAAAGGGGTGTATGTAACTTCTTTTGAACTTGGCTATGGTCAACAAATCGTAGGTGAAAGCGCAAGGGGTTCAACTTTATTAAAGCCACCAACAGGCGCAACGTATGTCATCACAATTAAGGCAACGGTAAGCGCAAGGCAGAATTGCCAAATTCGCAACATGACAATTTATAACCCAGGCGCAGTTGCTAATTGCGATGGCATCTATTTTAATAGCGCCAGCGTCAGCAATATTAACGATAGCCATTTGGTTGAAAACGTATTTATAAGTGGTTTTAGGTATGGAATTTATGTTACGGGAAGACAAATTCTTTGCCGATATTTAGGCATAGAAGTTACTACTTGTACCAAAGGAATGTACGTTGTTTCAGACGCATCAAATTACGCATACAACCTAAACTATTTTGAACAATGTCGATTTAGTTCTTGTACTCAAGAAGGCGTAAAAATTACTGGGTACAACATTGCAAATAAATTTGTTAACTGCAACGTAGAGTTAAACAATTCAAGCGCCGTTGCTGGGATTGCTGGCTTTTATATTGAAGATGCCGAAGGTTTATTTTTAGATAACCCGTATTTTGAATTAAATGGCTCTGCTGTTACTGTAGATACAGTAAACCCGTTAAACAACAGTATCGGTTTGTATTTAACTGGCGCACGGTGTTTTAACGTTCGGGTAACTAATGGTTGGATGGTTCAATCAGGAACAATAATTGCTGTAAATGTGTCATCGGGAATTATAGGCGGTGAAATTTCTGGCATTCGATTTGCACCTAGTTCTGGTGGTTTTGATGTCTATGTTGGAGATAAATTAAATGGCATCAACGGGCAGCCAATTATTATTGACTCCAACAACTATTTTTCTGGGCAGTTAAAGATTCTTTCACCCGCCTCTGGTTTAACTGCTGGTGCTGTTCGTCAAACTGCGGCTACTCAATTTATTGCAGCCGCAACAACATTGGATTTGCGTGCGGCTAATAAATTTTCAGTTTCTAACGCAACTGGATTTAACCTTGTAAATATTACAAATCGTTTTCCTGGCATGACCATGATGGTAAGTAATATTGGGGCTGGCACAGTAACTATTGATGCGTCTTTAATGAGCAGTGGTGTTGCTTCAAGTCTTGCTGCAAATGTATCAAAACAATATTTGGTTTTGGGGTATGGCAGTATTGGTAAGTTTGTAGAAATTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
ec81bb95fa53d9e10fa9f8362bb9bdfbc868f610ff516a9f264042dc1d7eee19
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8133
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50