Protein
View in Explore- Genbank accession
- ASU03475.1 [GenBank]
- Protein name
- putative carbohydrate binding protein
- RBP type
-
TSP
- Protein sequence
-
MKPINELDVFVPEVPLLEESDLVKGGEQGPSNAQALALASRTHFLNERRKELETELDRIDTALSGLDADKVGADAKGTATGLVDAHVKDADPHTQYLTDARGKLLFVDKTTANKPNGYLQLDANGKLPAGVVTSLSARYVIVADETERLKLTTTNDLTIAAQQSDDTLYYLNAGTDPSVKGNWIKGQSATVSGVVSFFGRTGVITAESGDYTADQINETLTRLFVSPQEKQTWNQKQDKLVSGTNIKTFKGQSLVGAGDLSFNYADFGAAAEIHKHVASDITDFNDKVDGRASSLLKAGQNIQLVVDPTTKAVTINAAPPNAASLFASVDRMGSSANQMHVINFNQDITYNLEAYALKLEKGSTNQVYTLETFDPTSAPFFNSTQYLTFNGVLGVAYNWTPTLRQNKTRYEMEFDPNVNALSLFSTAGKNIIPVMAGNGGINGYVPFASSEYSADYTAYRAFSNLQAANGASDCWASGKGQVPSAANPQWIGISLPAGVKITAYSFVNRSAGAVSTPSKYKLQGSNDKTTWDDIEAVRSNTNDAAAFEFFHSARPTKAYQHYRLYITERYPNNPDYDFVVVWRLRLYVEKPVVFQGETSDALYTLDSNNVLVPLTDISDAGIEAQGISVAKNIPPANLLAYPLKKIVGLEPSTLNVKLVPMEQIAIMKDPLVTKPFSKINAMNYTAVLLEKTRYAISPDGVTFYTYNGGTWTSLGALKNDLASAKKLAAQGMMNGLATGTIMTLYTQLGIRFTAFSLAYGIFPTVANEVISVDQTLLSVDFADTWKKQTPAEVEIRYSSGNISFKTVAAGDYKLVYQVA
- Physico‐chemical
properties -
protein length: 819 AA molecular weight: 88883,82780 Da isoelectric point: 5,38870 aromaticity: 0,09524 hydropathy: -0,20989
Domains
Domains [InterPro]
Coil
Unmapped
49–69
Unmapped
49–69
IPR008979
STR
432–587
STR
432–587
G3DSA:2.60.120.260
STR
446–591
STR
446–591
G3DSA:2.60.120.260
STR
446–590
STR
446–590
IPR000421
RBD
448–571
RBD
448–571
1
819
Architecture
STR 432-591 | RBD 592-819
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
819
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 616 | 616 | 0,7610 |
| Central domain | 617 | 808 | 193 | 0,4118 |
| C-terminal | 809 | 819 | 10 | 0,3389 |
Note: Constraints were applied during segmentation.
Fixed 38 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
Fixed 38 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-616
1-616
Central
617-808
617-808
C-terminal
809-819
809-819
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Erwinia phage vB_EamM_RisingSun [NCBI] |
2026080 | Uroviricota > Caudoviricetes > Chimalliviridae > Risingsunvirus risingsun > |
| Host | No host information | ||
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
ASU03475.1
[NCBI]
Genbank nucleotide accession
MF459646
[NCBI]
CDS location
range 171487 -> 173946
strand +
strand +
CDS
ATGAAACCGATCAATGAATTGGATGTATTTGTACCAGAGGTTCCTCTCTTAGAAGAATCAGATTTGGTAAAGGGCGGGGAACAAGGCCCGAGTAATGCTCAAGCACTGGCATTGGCTAGCCGTACCCATTTTCTCAATGAACGTCGTAAAGAACTCGAAACCGAACTCGACCGCATTGATACCGCACTCAGTGGTTTAGATGCTGATAAAGTTGGGGCCGATGCTAAAGGCACGGCAACCGGTTTGGTTGATGCGCACGTAAAAGATGCTGACCCACACACCCAGTATTTAACCGATGCCCGTGGTAAACTGTTGTTTGTGGACAAAACCACCGCCAACAAACCGAATGGGTATCTGCAGTTAGATGCCAACGGGAAACTGCCGGCCGGTGTTGTAACCAGCTTATCGGCACGCTACGTTATTGTGGCTGACGAAACAGAGCGACTGAAGTTAACAACCACAAATGACCTTACCATTGCAGCGCAGCAATCTGACGATACCCTGTATTACTTAAACGCCGGGACTGACCCTTCTGTCAAGGGTAATTGGATTAAGGGTCAATCGGCTACGGTATCGGGCGTCGTATCTTTCTTTGGTCGTACCGGGGTAATTACTGCTGAAAGCGGTGACTATACGGCTGACCAGATTAATGAAACGTTAACGCGGTTATTTGTTTCCCCTCAAGAGAAACAGACCTGGAACCAGAAACAGGATAAGCTAGTTTCCGGTACCAACATTAAAACCTTTAAAGGACAGTCTTTGGTTGGGGCGGGCGACCTTTCATTCAACTATGCTGACTTTGGTGCGGCAGCTGAAATACACAAGCATGTGGCTTCGGATATCACTGACTTTAATGATAAGGTAGACGGGCGTGCTTCTTCTTTATTAAAGGCAGGCCAAAACATACAGCTCGTGGTTGATCCTACAACCAAAGCCGTTACCATTAATGCGGCACCACCTAATGCGGCTTCATTGTTTGCTTCGGTTGACCGAATGGGTTCGTCTGCAAACCAGATGCACGTGATAAACTTCAACCAGGATATAACGTACAACCTGGAAGCGTATGCTTTGAAGTTAGAGAAGGGGTCGACTAACCAGGTGTATACCTTGGAAACGTTTGATCCAACTTCTGCACCGTTCTTTAACTCTACCCAATATCTGACCTTTAACGGTGTTTTGGGTGTGGCGTATAACTGGACACCGACGCTGCGTCAAAACAAAACGCGTTATGAAATGGAATTCGATCCGAACGTTAATGCTTTATCACTGTTCTCTACAGCCGGTAAAAACATTATCCCGGTGATGGCAGGCAATGGTGGGATTAACGGTTATGTGCCGTTTGCATCTTCGGAGTACAGTGCGGACTATACAGCATATCGTGCGTTCTCCAACCTCCAGGCTGCTAATGGTGCATCAGACTGTTGGGCATCAGGTAAAGGCCAAGTTCCGTCTGCTGCTAACCCACAATGGATAGGTATCTCTTTGCCTGCGGGCGTTAAGATAACAGCGTACAGTTTTGTGAACCGTAGTGCAGGTGCGGTATCCACACCGTCTAAATATAAACTCCAGGGCAGTAACGATAAAACCACCTGGGATGACATTGAAGCGGTACGCTCTAACACTAACGATGCAGCGGCGTTTGAGTTCTTCCATTCAGCGAGACCTACCAAAGCCTATCAGCATTATCGTCTCTACATTACTGAACGTTATCCTAACAATCCCGACTATGACTTTGTCGTGGTTTGGCGTTTACGGTTGTATGTAGAGAAACCGGTGGTGTTCCAGGGTGAGACCAGTGATGCTTTATACACACTGGACAGTAATAACGTATTGGTTCCGTTAACTGACATCTCTGACGCGGGTATTGAAGCACAGGGTATTTCGGTGGCTAAAAATATTCCACCGGCAAACCTGTTGGCTTATCCGTTGAAAAAGATTGTGGGACTGGAACCCTCTACCCTGAACGTCAAGCTTGTCCCGATGGAACAGATCGCCATCATGAAAGACCCGTTGGTGACGAAGCCGTTTAGTAAAATAAACGCCATGAACTACACCGCGGTCCTGTTGGAAAAGACCCGGTACGCTATCTCCCCTGACGGTGTTACCTTCTATACTTACAACGGCGGTACGTGGACGTCATTAGGGGCGTTGAAGAACGACCTGGCGTCAGCGAAGAAATTGGCGGCTCAAGGTATGATGAACGGCTTGGCAACAGGGACTATCATGACCTTGTACACCCAGCTGGGGATTAGATTCACGGCGTTCAGTTTGGCCTACGGGATTTTCCCAACGGTAGCCAACGAAGTTATCTCGGTCGACCAAACGTTGTTGAGTGTGGATTTCGCGGATACGTGGAAGAAACAAACACCGGCTGAGGTAGAGATTCGTTACAGCTCCGGGAATATCTCCTTTAAAACGGTGGCAGCGGGAGACTACAAGCTAGTTTACCAAGTCGCCTAA
Genome Context
Genome Context
Tertiary structure
PDB ID
a8167696206a454ad2334b68c9609d2a6b324c5683970910dd4f8e93a1d3b3ad
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50