Protein

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Genbank accession
AMD42761.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,90
Protein sequence
MGTNASFDPQDTCPEPMTRAELLALRAAGELDIQCHYIVTDGPVIGTTGNTSPTRILMHAVSATELSTNVHVDTLFTPTAQVWPGGYDIDLGTQGSLFKLTDDFNNEVTDSDPDAPTVHVQFPWHLRGTGLRDNRVDDCTLTGWDTAVAAGVLVWDNKLLHAGVHLSGMVDGTFSRNDIQGPQVTVGAPNVLFNSNVIHNAPVTFSGSNAGVQSFQANTLLSGLVDVDSSTTGPVDMNENVIGGEGITGYRIIVTAATGSVDISGNRLFNQGPSLTHELRATGAGPVVVSSNEFGAGTVDINSASAVTIVASALVEPTLSVTTGTDIHALRVSNATVNVSGTTGSSILDTDVIGSTLNLSGPGGLSNGRMLGTTLTSGGFTMDVFDIVGGTKTLTANQSDRLRNASFTNLV
Physico‐chemical
properties
protein length:411 AA
molecular weight: 42612,78140 Da
isoelectric point:4,46774
aromaticity:0,05109
hydropathy:0,02652

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AMD42761.1
1 411
Domain Start End Length (AA) Confidence
N-terminal 1 31 31 0,2214
Central domain 32 392 362 0,9770
C-terminal 393 411 18 0,6027
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-31
Central
32-392
C-terminal
393-411

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptomyces phage Xkcd426
[NCBI] 		1784947 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AMD42761.1 [NCBI]
Genbank nucleotide accession
KU530220 [NCBI]
CDS location
range 22476 -> 23711
strand +
CDS
ATGGGAACCAACGCCAGCTTCGATCCGCAGGACACCTGTCCCGAGCCGATGACCCGCGCCGAACTGCTCGCGCTACGTGCGGCCGGGGAACTGGACATCCAGTGTCACTACATCGTCACGGACGGGCCGGTCATCGGCACGACCGGCAACACGTCGCCGACGCGGATCCTGATGCACGCCGTGAGCGCCACCGAGCTGTCAACCAACGTGCACGTGGACACGCTGTTCACGCCGACGGCGCAGGTGTGGCCGGGCGGGTATGACATCGACCTCGGCACGCAGGGCAGCCTGTTCAAGCTGACCGACGACTTCAACAACGAAGTGACCGACTCGGACCCGGACGCGCCGACGGTGCACGTCCAGTTCCCATGGCACCTGCGCGGCACGGGCCTGCGGGACAACCGGGTCGACGACTGCACGCTGACCGGCTGGGACACCGCCGTGGCGGCCGGTGTGCTGGTCTGGGACAACAAGCTGTTGCACGCCGGTGTTCACCTGTCCGGCATGGTCGACGGTACGTTCTCACGCAACGACATCCAGGGCCCGCAGGTCACGGTGGGTGCCCCGAACGTGCTGTTCAACAGCAACGTGATCCACAACGCGCCGGTGACGTTCTCTGGCTCGAACGCGGGCGTGCAGTCGTTCCAGGCGAACACGCTGCTGTCCGGCCTGGTCGACGTCGACTCGTCCACCACCGGCCCGGTGGACATGAACGAAAACGTGATCGGCGGTGAGGGCATCACCGGCTACCGGATCATCGTGACGGCCGCCACGGGTTCGGTCGACATCTCGGGCAACCGGCTGTTCAACCAGGGTCCGTCCCTTACCCACGAATTGCGGGCGACCGGGGCCGGACCGGTCGTCGTCTCGTCGAACGAGTTCGGGGCCGGAACGGTCGACATCAACTCAGCCTCGGCCGTCACGATCGTGGCGTCCGCCCTGGTGGAACCGACGCTCAGCGTCACGACGGGAACGGACATTCACGCACTGCGTGTCTCGAACGCGACCGTGAACGTCTCGGGCACGACCGGCAGCAGCATCCTGGACACAGACGTCATCGGATCCACGCTGAACCTGTCCGGACCGGGGGGCTTGTCGAACGGCCGGATGCTCGGGACGACGCTCACCAGCGGCGGCTTCACCATGGACGTCTTCGACATCGTGGGCGGCACGAAGACCCTGACGGCGAACCAGTCGGACAGGCTTCGTAACGCGTCCTTCACCAACCTGGTCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
7fa48a16a8ad7c97d14aa057af92daf288487dc665cd6931688e8f747973b6cc
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6217
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50