Protein

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Genbank accession
WJZ48117.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,79
Protein sequence
MSKILNVRLPDASGANYDPQKFNQLVRSLEQVILQLNSTYTPVTSENTQAALSWFEAGGGQCEMNSGSTVPISIGGTNVDAFGRLRASEPYSLFDSQSRYASDNQFDTSTSGTGTSTFNTNQSSVSLAVTGAGVGSVVRQSFRNMLYQPGKSLLVLATFQMDNSTSANLNQSVGYFNTQNGLFFRRTGGVNAFVMRSNTSGTPSDARFVNQADWNGDKLDGTGASGYTLDLTHPQILWMDFEWLGVGSVRCGFIIDGQYVLCHTFNTANVYGTTVYMTTAILPVRYEITTTTAAVAATLTQICSSVISEGGFEAISIEHVARRTTVLNTINTAANFFPVVSIRLASTALGAVVLPNRIQFQPTTLQDYEIALIKNPVLTGATWAATVPSDSNVEFDVAATAIATAGTIVQTGYIASSGGGGQANTTAPTGFNWDQQLGVSLTGVSDIYTLGVRTIAGATTGDGVGCITFYDLTQ
Physico‐chemical
properties
protein length:474 AA
molecular weight: 50274,41420 Da
isoelectric point:4,77939
aromaticity:0,09283
hydropathy:0,01793

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WJZ48117.1
1 474
Domain Start End Length (AA) Confidence
N-terminal 1 260 260 0,2712
Central domain 261 459 200 0,0011
C-terminal 460 474 14 0,9985
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-260
Central
261-459
C-terminal
460-474

Taxonomy

  Name Taxonomy ID Lineage
Phage Phage DSL-LC04
[NCBI] 		3058958 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Gammaproteobacteria
[NCBI] 		1236 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WJZ48117.1 [NCBI]
Genbank nucleotide accession
OR003939 [NCBI]
CDS location
range 45842 -> 47266
strand -
CDS
ATGAGCAAAATATTAAATGTCCGCTTACCCGACGCCTCTGGTGCAAACTATGACCCACAAAAGTTTAACCAACTGGTTAGGTCGTTGGAACAAGTTATTCTGCAACTTAACAGTACTTACACGCCAGTTACAAGCGAAAACACGCAAGCAGCCTTGTCATGGTTTGAAGCTGGTGGAGGACAGTGTGAAATGAATTCAGGCTCAACAGTTCCAATCTCAATAGGTGGCACCAACGTAGATGCGTTTGGAAGACTACGGGCCAGTGAGCCATACAGCCTGTTTGACAGCCAAAGCCGTTACGCCTCCGACAATCAATTTGACACATCTACATCAGGTACTGGGACATCGACATTTAACACCAATCAGTCTAGCGTTAGTTTGGCTGTGACAGGTGCTGGTGTTGGTTCTGTGGTACGTCAGTCATTCCGCAACATGCTGTACCAGCCGGGAAAAAGCCTGTTGGTTCTAGCTACATTCCAGATGGACAACAGCACATCTGCCAACCTTAATCAAAGTGTTGGGTACTTTAATACCCAAAACGGACTGTTCTTCCGTCGCACCGGAGGCGTTAATGCGTTTGTGATGCGTTCAAATACTTCTGGCACGCCAAGCGATGCACGGTTTGTCAATCAAGCAGACTGGAATGGGGACAAACTAGACGGCACGGGTGCCTCTGGGTACACCCTTGACTTGACCCACCCACAGATTTTATGGATGGACTTTGAGTGGCTGGGCGTCGGTTCGGTCCGATGCGGCTTTATTATTGACGGGCAATATGTTCTTTGTCATACATTTAATACCGCCAACGTCTACGGCACAACGGTCTACATGACCACTGCCATACTGCCTGTTCGCTACGAGATCACCACTACAACGGCAGCAGTTGCCGCCACTCTCACGCAGATTTGTTCCTCGGTAATTTCTGAGGGTGGCTTTGAGGCCATATCAATTGAGCACGTCGCAAGGCGTACAACAGTACTTAACACCATAAACACAGCGGCTAACTTTTTCCCGGTTGTCTCAATTAGACTGGCATCGACGGCGTTAGGCGCTGTGGTGCTTCCAAACCGTATACAGTTTCAACCAACCACGCTACAAGACTACGAAATTGCTTTAATCAAGAACCCAGTTCTTACAGGGGCTACTTGGGCGGCCACCGTCCCTTCTGACAGCAATGTGGAATTTGACGTTGCGGCTACGGCGATTGCCACGGCAGGCACGATTGTTCAGACCGGATATATCGCTAGTTCGGGTGGTGGAGGTCAAGCAAATACGACGGCCCCTACTGGGTTTAATTGGGATCAGCAACTTGGCGTATCCCTGACAGGCGTTAGTGACATTTATACCTTAGGTGTCCGCACAATTGCCGGTGCCACAACTGGCGATGGTGTTGGCTGTATTACCTTCTACGACCTTACTCAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2b7f6f81a19e3bb25e2463472811627dfccade933d8dea356085e58554489125
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7259
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50