Protein

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Genbank accession
UJD21504.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MATNIKTVMTYPLDGSTTDFNIPFEYLARKFVRVTLIGVDRKELILNQDYRFATKTTISTTRALGPADGYNMIEIRRFTSATDRLVDFTDGSILRAYDLNISQVQTLHVAEEARDLTADTIGVNNDGDLDARGRRIVNVADGREPGDAITLGQVQRWNSSALTSANKAAASEQNALTYRNDAERFKNEANSFRDSAETSKNLAQTADQQAYAHRVVAEEAARNSENSFQAALSSRNDAERFKNEAKGFRDSAEAAAGTAQKYGDKVLEGMATLGSLPIGTVVMVLRGNPPIGFLECGVPFDTKAYPALAKLFPEGVTPTFHNRFPRGYANNPQAHETGKGQYGEQNMPAHNHELRATGRTGDAGAGRYWTSGGGAHSHNVTIPFKNASGAYQHAGYVRLGSNGGYEGSDTFGTSGVGDHNHFTDLPNHAHDVTVMGNTLGNGGQIGAGHNHITPYNVGVMFCIKAYEGIAELDQATVVVGTIVGRVENLEARALAAENRVATLERYRKAVKVLEAPDVEFATDRVETVWYSDMSRIISNLGDTIPTGTTRCTVAITLDIHNPGIAIYNQRVTAIAELMSGTNDERIVWLPTTSMGHAINATNIEIGIKYRAAREGGDPHFVFRINRGETLISRGFYSMWASVIHYF
Physico‐chemical
properties
protein length:646 AA
molecular weight: 70329,43750 Da
isoelectric point:6,11527
aromaticity:0,08204
hydropathy:-0,38529

Domains

Domains [InterPro]
IPR005604
ATT
1–131
IPR005604 Coil SSF88874 Coil
DC_0657
STR
1–631
DC_0657
IPR037053
ATT
274–326
IPR037053
UJD21504.1
1 646
Architecture
ATT
STR
ATT
STR
ATT 1-131 | STR 132-273 | ATT 274-326 | STR 327-631 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_SAg-RPN15
[NCBI] 		2910948 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica
[NCBI] 		28901 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UJD21504.1 [NCBI]
Genbank nucleotide accession
OL800605.1 [NCBI]
CDS location
range 26135 -> 28075
strand -
CDS
ATGGCTACAAATATTAAGACCGTGATGACTTACCCGCTGGATGGCTCCACTACGGACTTTAATATTCCGTTCGAGTATCTGGCGCGTAAGTTCGTTAGAGTGACACTTATCGGTGTTGACCGAAAGGAACTCATCTTGAATCAGGACTACCGCTTTGCGACTAAGACCACAATCTCCACAACGAGAGCATTAGGGCCAGCCGATGGTTATAACATGATTGAAATCCGTCGATTTACCTCCGCTACCGATAGGCTGGTTGACTTCACCGATGGTTCAATCCTTCGGGCATACGACCTGAACATCTCTCAGGTTCAAACCCTTCACGTTGCTGAGGAAGCACGTGACTTAACGGCTGACACTATTGGCGTTAACAACGATGGGGACTTAGATGCTCGCGGTCGTCGTATCGTTAATGTGGCTGACGGTAGGGAACCCGGAGATGCCATAACCTTGGGTCAAGTACAGCGATGGAATAGCTCTGCACTTACTTCTGCAAACAAGGCGGCTGCTAGTGAACAGAATGCCCTAACCTACCGTAATGATGCTGAACGTTTCAAGAATGAAGCTAACAGTTTCCGTGACTCTGCTGAGACCTCAAAGAACTTAGCGCAAACGGCAGACCAACAGGCTTATGCTCACCGAGTAGTGGCTGAAGAGGCTGCACGTAACTCCGAGAACTCTTTCCAAGCCGCCCTGTCTTCTCGTAATGATGCTGAACGTTTCAAGAATGAAGCCAAGGGTTTCCGTGACTCTGCTGAGGCTGCTGCTGGAACTGCACAGAAGTATGGTGACAAGGTGTTGGAAGGGATGGCTACTCTTGGTAGTTTACCAATTGGTACTGTGGTTATGGTGCTGCGTGGTAATCCACCTATTGGATTCCTTGAGTGTGGCGTTCCGTTTGACACGAAGGCTTACCCGGCTCTGGCTAAGTTGTTCCCTGAAGGCGTGACTCCAACGTTCCACAACAGGTTCCCACGAGGTTATGCTAACAACCCTCAAGCTCATGAGACTGGTAAGGGTCAATATGGTGAACAGAACATGCCAGCACATAACCATGAGTTAAGAGCTACTGGTAGAACAGGCGATGCTGGTGCAGGTCGTTACTGGACAAGTGGCGGCGGTGCGCACAGTCACAACGTGACAATTCCATTCAAGAACGCTAGTGGTGCATACCAACATGCTGGCTATGTGCGTCTTGGTTCGAACGGTGGTTATGAGGGTTCTGATACATTCGGGACTTCTGGAGTGGGTGATCACAATCACTTCACGGACCTTCCTAATCATGCTCACGATGTAACAGTGATGGGCAACACGCTGGGAAACGGGGGTCAGATTGGTGCTGGTCATAACCACATCACTCCGTACAACGTTGGTGTAATGTTCTGTATCAAAGCATATGAGGGAATCGCTGAGTTAGACCAAGCGACAGTTGTGGTTGGTACTATCGTGGGTCGAGTAGAGAACCTAGAAGCTCGTGCGCTGGCTGCTGAGAACCGAGTGGCTACCTTAGAGAGATACCGGAAGGCCGTCAAGGTGCTTGAAGCTCCTGATGTTGAGTTTGCGACAGACCGTGTTGAGACAGTGTGGTACTCCGATATGAGTCGAATCATTTCAAACTTAGGGGATACTATCCCTACTGGAACAACTAGATGTACTGTGGCGATAACTCTTGACATCCATAATCCGGGGATCGCTATCTACAATCAGCGCGTAACAGCGATTGCTGAGTTGATGTCCGGGACTAATGATGAGAGAATCGTATGGTTGCCAACAACCTCGATGGGTCACGCTATCAACGCCACCAACATTGAGATTGGAATCAAGTATAGGGCTGCTAGAGAGGGTGGAGACCCTCACTTTGTGTTTAGGATTAACAGAGGCGAAACTCTAATCTCCCGTGGTTTCTACTCAATGTGGGCTTCGGTTATTCACTACTTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
73c695ac2207a75b105081f56a168b19cc95d61159eeedfbbb48e71044676163
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6071
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization and complete genome sequence of Salmonella phage vB_SAg-RPN15 Imklin,N., Sriprasong,P. and Nasanit,R. 2022-01-10 — GenBank