Protein

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UniProt accession
A0A8D9PDI4 [UniProt]
Protein name
Collagen I alpha 1
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MTRTIPLKIQNEYITGDKCMIGAVGSHNDVILRMEFSGMWDGLTKMVQFRDALGEATIEVLLTADMLEADDTSVYLVPVPNGAKKYAGEMTLCVKGATVSAQKETRATTAVYGRFTVGESKWDTSAETEQDVPPTQAEQLQSQIENVLATIVDARKAATEAAKSAEGAALSQSRAQTSEQYAGEYAQGAANSAASASSSATAAASSATAAAANADAAAGSATNAAASATSAGNSASAASEKASDAANSASAAATSAQTAQSAASTASNSAGLAIGSAAAAKTSETNAKSSETSAAGSAAAADNSEKKATAAATKAEAASNHPPRINSNGKWELWDFDNSRYVATSYDAQGPKGDTGATGATGATGATGAAAGFGTPSATVDANVGTPSVQISASGPDTAKVFAFTFRNLKGNKGDKGESGDSYTVLGLYGTLLALQAAHPTGEVGQAWFVGTADDNVVYQWDVDKGQWVNVGALKGPKGDKGDTGATGPQGPQGVQGIQGEKGEQGATGATGPTGPTGPEGPEGPQGPQGETGPQGEQGIQGPQGEAGESAYTAASKGGYTGTETQFNSDLAKIGNKVDKTAPAAAGNLAALDAAGNLSDSGKKPADFQAKVTASGLLKGDGNGGVTAATKGMDYAGASETVTATLLAASWSGDAAPYSYALTVSGVTATSNQEVLPALNITAEQLEALQSANIQDGGQAANSMTLKAYGDKPTIDLPIRVIKRGD
Physico‐chemical
properties
protein length:726 AA
molecular weight: 72286,89540 Da
isoelectric point:4,66270
aromaticity:0,04959
hydropathy:-0,34353

Domains

Domains [InterPro]
DC_0840
STR
17–249
DC_0840 DC_0268 IPR008160
Coil
Unmapped
137–157
Coil IPR050938
DC_1065
STR
397–528
DC_1065
DC_1266
STR
499–715
DC_1266
G3DSA:1.20.5.320
STR
521–571
G3DSA:1.20.5.320
A0A8D9PDI4
1 726
Architecture
STR
ATT
STR
STR 17-249 | ATT 256-425 | STR 426-715 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Podoviridae sp. ct5O42
[NCBI] 		2826084 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAD55339.1 [NCBI]
Genbank nucleotide accession
BK014723 [NCBI]
CDS location
range 4974 -> 7154
strand -
CDS
ATGACGAGGACGATCCCTCTGAAAATCCAAAATGAGTATATCACCGGCGACAAGTGCATGATCGGCGCTGTCGGGAGCCACAACGATGTTATTCTCCGCATGGAGTTCTCTGGCATGTGGGACGGCCTGACAAAAATGGTGCAGTTCCGCGATGCGCTGGGGGAGGCCACGATAGAGGTGCTTTTGACCGCTGACATGCTGGAGGCGGACGATACCAGCGTGTATCTTGTGCCGGTGCCAAACGGGGCCAAAAAGTACGCCGGTGAAATGACGCTGTGCGTCAAGGGCGCTACAGTGTCCGCGCAGAAAGAGACACGGGCCACCACGGCAGTGTACGGGCGGTTCACCGTGGGCGAGAGCAAGTGGGACACCAGTGCAGAGACGGAGCAGGACGTGCCGCCCACGCAGGCGGAGCAGCTGCAAAGCCAGATCGAAAACGTGCTTGCCACCATCGTGGACGCGCGAAAGGCGGCGACGGAGGCGGCGAAAAGCGCAGAAGGCGCGGCATTGTCACAGTCCCGTGCACAGACTTCTGAGCAATACGCGGGTGAATATGCGCAAGGCGCGGCAAACAGCGCAGCAAGCGCATCGTCCAGCGCAACCGCAGCGGCAAGCAGCGCGACGGCGGCAGCGGCCAATGCGGACGCTGCTGCTGGGAGTGCAACGAACGCCGCCGCCAGTGCCACCAGTGCTGGCAACAGTGCATCTGCGGCAAGCGAAAAGGCCTCTGATGCCGCAAACAGTGCATCGGCAGCGGCGACGAGTGCACAGACGGCGCAGAGCGCGGCCAGTACGGCAAGCAATAGCGCGGGGCTTGCAATCGGTTCTGCCGCGGCGGCAAAGACCTCCGAGACCAACGCCAAGAGCAGCGAGACAAGCGCCGCAGGCAGCGCCGCAGCGGCGGATAATAGCGAGAAAAAAGCCACGGCGGCGGCCACTAAAGCGGAGGCGGCCAGCAATCATCCGCCACGGATCAACAGCAATGGCAAGTGGGAGCTGTGGGATTTTGACAACAGCCGGTATGTGGCCACCAGCTACGACGCGCAGGGACCCAAAGGCGACACCGGGGCTACCGGCGCGACGGGTGCGACGGGCGCGACCGGTGCGGCAGCTGGCTTCGGTACGCCCAGCGCCACGGTGGACGCCAATGTAGGCACGCCAAGCGTACAGATAAGCGCCAGCGGACCGGACACGGCAAAGGTGTTTGCGTTTACGTTCCGCAACCTCAAGGGTAACAAGGGCGACAAAGGCGAAAGCGGCGACAGTTACACGGTGCTGGGTCTGTATGGAACGCTGCTGGCCTTGCAGGCGGCGCACCCCACCGGAGAGGTCGGACAGGCGTGGTTCGTAGGTACGGCGGATGACAACGTGGTATACCAGTGGGACGTGGACAAGGGCCAGTGGGTGAACGTGGGCGCGCTGAAGGGCCCGAAGGGAGACAAGGGCGACACTGGTGCCACCGGCCCCCAGGGCCCCCAGGGCGTACAGGGTATCCAGGGTGAAAAGGGTGAGCAGGGCGCTACTGGCGCGACGGGTCCCACCGGCCCTACCGGCCCGGAGGGACCGGAAGGCCCCCAGGGCCCCCAGGGCGAGACCGGCCCGCAGGGCGAGCAGGGCATCCAAGGCCCCCAGGGCGAGGCAGGCGAGAGCGCCTACACCGCCGCCAGCAAGGGCGGCTACACCGGCACGGAAACGCAGTTCAACAGCGACCTGGCCAAGATCGGGAACAAGGTGGACAAGACGGCGCCCGCAGCGGCGGGCAACCTGGCCGCGCTGGACGCGGCGGGCAATCTGTCCGACAGCGGCAAGAAGCCCGCTGACTTTCAGGCCAAGGTGACGGCCAGCGGACTGCTGAAAGGCGACGGCAATGGCGGCGTGACCGCGGCAACAAAAGGCATGGACTATGCAGGGGCCAGCGAAACGGTTACGGCCACGCTGCTTGCGGCAAGCTGGTCAGGTGATGCGGCACCGTACAGCTACGCGCTTACGGTAAGCGGTGTAACGGCCACCAGCAATCAGGAGGTCTTGCCTGCGTTGAACATCACGGCAGAGCAGTTGGAAGCCTTGCAGAGCGCAAACATTCAGGACGGCGGACAGGCGGCAAACAGCATGACGCTGAAAGCTTACGGTGACAAGCCGACTATTGACCTGCCTATCCGCGTGATAAAGAGAGGTGACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
3dc952930a2ff5df8133b91b6a3da8479425694a0657bdf8bcf2b5237691a031
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7563
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50