Protein

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Genbank accession
UPW42355.1 [GenBank]
Protein name
long-tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MEKMMASFGNGYTKTQVISENNSIKYKISFAAGSVFSTPSSAYFTFQDNPIGDQQDGAGINIRVFNPALNTVSAKKTFLLTPNDNDPGNRAFIEYLSTFTQDNTNLLIFTTSGDIKTSNLVENKFKSIYSTMWPNKWMTSRYSCTYCGLFSIKNNKIIAENVTYSDGVLRDEDIRPALEFVYDKANDIGATGFSYRAVEDFEEYTSSAATIKRYPVDSASGVEISSIGISPGDILFWSFEFLHGDNIPPEVPGTNNNKIRIEIRWLNSSGGWIKSVNVDSNHANAGKWIHHEQTVEVPADAARIVILASKTSPTDTVGTGGVRSMILTETSRATEALTSPSAISVNGIRLNTIVSGDNPALLILPANEVDSTGKPLPGEDVSGIIYSSDWREFEKNI
Physico‐chemical
properties
protein length:397 AA
molecular weight: 43510,05320 Da
isoelectric point:4,98634
aromaticity:0,09824
hydropathy:-0,27531

Domains

Domains [InterPro]
DC_0912
STR
1–397
DC_0912
PS52031
LEC
22–197
PS52031
UPW42355.1
1 397
Architecture
STR
STR 1-397
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UPW42355.1
1 397
Domain Start End Length (AA) Confidence
N-terminal 1 140 140 0,3347
Central domain 141 386 247 0,6104
C-terminal 387 397 10 0,2384
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-140
Central
141-386
C-terminal
387-397

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage CF-SP2
[NCBI] 		2935508 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica subsp. enterica
[NCBI] 		59201 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Salmonella

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UPW42355.1 [NCBI]
Genbank nucleotide accession
OM912978.1 [NCBI]
CDS location
range 37263 -> 38456
strand +
CDS
ATGGAAAAAATGATGGCGAGTTTTGGTAACGGATATACCAAAACTCAAGTTATTTCTGAAAATAATTCCATCAAATACAAAATTTCATTTGCTGCGGGGTCGGTTTTTTCGACCCCTTCTTCTGCTTATTTTACCTTTCAGGATAATCCAATAGGTGACCAGCAAGATGGTGCTGGTATAAATATCAGAGTTTTTAATCCAGCATTGAATACTGTATCTGCTAAGAAAACATTTTTATTAACACCCAATGATAATGACCCAGGCAATAGAGCATTCATTGAATATTTGTCAACATTTACTCAAGATAATACTAACTTGTTAATATTCACCACATCAGGTGATATTAAAACGAGCAATTTAGTAGAGAATAAATTTAAGTCCATTTATTCAACTATGTGGCCAAATAAATGGATGACATCTCGGTATTCATGTACTTATTGCGGTTTATTTTCAATAAAAAATAATAAAATTATTGCCGAAAACGTAACATATTCTGATGGAGTTCTTCGGGACGAAGACATCAGACCTGCTTTAGAATTCGTTTATGATAAAGCCAATGATATTGGAGCTACCGGGTTTTCTTATAGAGCTGTTGAAGATTTTGAAGAATACACTAGTTCCGCGGCAACAATAAAAAGATATCCAGTTGATTCTGCTTCGGGCGTAGAAATTAGCTCAATTGGAATATCTCCTGGCGATATTCTGTTCTGGTCATTTGAATTTTTGCATGGAGATAATATTCCGCCAGAAGTTCCAGGGACAAATAATAATAAAATAAGAATAGAAATAAGATGGTTAAATTCATCCGGAGGGTGGATTAAATCAGTTAATGTTGACTCTAACCACGCAAATGCTGGAAAATGGATACATCATGAACAAACTGTTGAAGTCCCTGCTGACGCTGCCCGGATAGTTATTCTTGCTTCTAAAACGTCTCCAACTGATACGGTCGGTACTGGAGGTGTTCGTAGTATGATTTTAACTGAAACTTCGCGTGCTACTGAGGCATTAACTTCTCCATCTGCGATATCAGTTAATGGTATTCGTTTGAATACTATAGTTTCAGGAGATAACCCGGCGCTGCTTATTTTACCTGCTAACGAAGTTGATTCAACTGGCAAACCATTACCAGGTGAAGATGTTTCAGGAATAATTTACAGTTCTGATTGGAGAGAGTTTGAGAAAAATATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
898463509cbcafb166d6a50634b1142b4efe9556a58ecdfba29a52ac098da46e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6655
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50