Protein

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Genbank accession
QCW22993.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,57
TF
Evidence RBPdetect2
Probability 0,72
Protein sequence
MSRIRANNIVNGAGTGAPTFPNGAVISGIATINADIDSNSNITVNQITSLQSLGVGTGATVTNPADNELAFNTNGTERVRVDSSGNVGINTTPSYALDVNSAAIQIGNSTDAFIQYKSTAGNWHAGAHSDNALVFYSGTYGTGTEKMRLNSAGNLVFPSGQGIDFSATGDGSGVASSELFDDYEEGSWSPIFADSSGAQASQTYSVQRGRYVKVGRHLTCTFDVQLSAKGTFGGSYIILGGLPYSTTQGSNCGGTLTIGYYSGFSLPAQANVINGYVNSGNVYIMTPRDANGSDYLTTGEVSQINNDSRLIGTINIMLDV
Physico‐chemical
properties
protein length:320 AA
molecular weight: 33182,86470 Da
isoelectric point:4,56419
aromaticity:0,08438
hydropathy:-0,15750

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QCW22993.1
1 320
Domain Start End Length (AA) Confidence
N-terminal 1 13 13 0,8633
Central domain 14 212 200 0,1173
C-terminal 213 320 107 0,9989
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-13
Central
14-212
C-terminal
213-320

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-B05
[NCBI] 		2484637 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp. MW02
[NCBI] 		1620844 Cyanobacteriota > Cyanophyceae > Synechococcales > Synechococcaceae > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QCW22993.1 [NCBI]
Genbank nucleotide accession
MK799832.1 [NCBI]
CDS location
range 149644 -> 150606
strand +
CDS
ATGTCTAGAATAAGAGCCAATAACATTGTCAATGGTGCTGGTACTGGAGCTCCTACATTTCCTAATGGTGCAGTCATCAGTGGAATTGCAACAATAAATGCTGATATTGATTCGAATAGTAATATTACTGTGAATCAGATTACATCATTACAATCACTTGGAGTCGGTACTGGAGCAACTGTTACTAACCCTGCTGATAATGAACTCGCATTTAATACTAATGGAACTGAGAGAGTTCGTGTAGATTCAAGTGGCAATGTTGGCATTAATACAACTCCTTCATATGCCCTGGATGTAAATAGTGCTGCCATTCAGATTGGAAACTCTACAGACGCATTTATTCAGTATAAATCAACAGCAGGTAATTGGCACGCAGGAGCACACTCCGACAATGCTTTAGTGTTTTATAGTGGTACATATGGAACTGGCACTGAGAAAATGCGTCTCAACAGTGCTGGTAATTTAGTATTTCCTTCAGGACAAGGTATTGACTTCTCTGCCACTGGTGATGGTTCAGGAGTAGCATCATCTGAACTTTTTGATGATTATGAAGAAGGCTCTTGGTCACCTATATTTGCAGATTCTTCTGGTGCACAGGCAAGTCAAACGTATTCTGTCCAGAGAGGTAGATATGTTAAGGTTGGTAGACATTTGACCTGTACTTTTGATGTTCAATTGTCTGCTAAGGGTACGTTTGGGGGGTCTTATATAATCCTTGGTGGTTTACCTTATTCAACTACTCAGGGCTCGAACTGTGGTGGTACATTGACCATTGGTTACTATTCTGGATTTAGTTTACCTGCACAAGCAAATGTAATAAATGGTTATGTAAATTCAGGAAATGTGTATATTATGACTCCTCGTGACGCTAATGGGTCAGACTATCTTACAACTGGTGAAGTTTCACAAATAAATAATGATTCTAGACTGATTGGTACTATTAATATAATGTTAGATGTTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
c708764e4e559cba3db0b9036d1474ac256fef33d843109454bed6ecfff12392
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7817
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Isolation and Genome Sequence of a Novel Cyanophage S-B05 from the Bohai Sea, China Jiang,T. 2020-10 — GenBank