Protein

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Genbank accession
WVQ00148.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,67
Protein sequence
MALNFPSSPSNGQEYVAPNGITYIYDAAAGLWYVKTSDAIGTSDIADSAITTAKLADDSVTTAKIAGDVSINTTGDLTANSLTLPTAPVVGYQQGSWTPTCDRGSLTDVAANCIWMRIGNQVTVYGLVRNLTDRSSNAVAIEGLPYPAPNAGVSAGRAFYIGATAGFETTYVSSSNIQFYKSDSGSSFAVGAMEYSDTTDNFDIYFGATYLTDDTTWTPINNATVS
Physico‐chemical
properties
protein length:226 AA
molecular weight: 23713,73880 Da
isoelectric point:4,05003
aromaticity:0,10619
hydropathy:-0,05177

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WVQ00148.1
1 226
Domain Start End Length (AA) Confidence
N-terminal 1 73 73 0,7722
Central domain 74 215 143 0,0260
C-terminal 216 226 10 0,9969
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-73
Central
74-215
C-terminal
216-226

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage MA10
[NCBI] 		3117465 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp. MW02
[NCBI] 		1620844 Cyanobacteriota > Cyanophyceae > Synechococcales > Synechococcaceae > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WVQ00148.1 [NCBI]
Genbank nucleotide accession
PP110483 [NCBI]
CDS location
range 163809 -> 164489
strand -
CDS
ATGGCACTCAACTTCCCTTCCAGTCCCAGTAACGGTCAAGAGTATGTGGCACCCAACGGTATCACATACATCTATGATGCTGCAGCAGGTCTGTGGTATGTAAAGACCTCCGATGCAATCGGTACTAGTGATATTGCAGACTCGGCAATCACCACTGCCAAGTTGGCCGATGACTCGGTGACGACTGCCAAGATTGCTGGTGATGTTAGTATCAATACCACCGGTGACCTTACTGCCAACTCTCTGACACTCCCTACGGCTCCTGTTGTTGGTTATCAACAAGGATCGTGGACTCCAACATGTGACAGAGGTAGCTTGACTGATGTAGCTGCCAACTGTATCTGGATGAGAATTGGTAACCAAGTGACGGTTTACGGATTAGTGCGAAACCTTACTGACAGGTCTTCGAATGCAGTAGCAATTGAAGGGCTTCCATATCCAGCACCTAACGCTGGTGTATCTGCTGGCAGGGCTTTTTACATAGGCGCGACGGCTGGGTTTGAAACTACTTACGTGTCTAGTTCCAACATCCAATTCTACAAATCCGACAGCGGCTCTTCGTTTGCTGTGGGGGCCATGGAATACAGCGACACCACCGATAACTTCGATATCTATTTTGGAGCCACCTACCTAACCGACGACACCACCTGGACACCAATCAATAACGCTACAGTTTCCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
3dec51f2d5ba62c3bd9d81a1502f1736f5d8c932dd2e6bf887fcf7e5b5c698d8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7171
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50