Protein

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Genbank accession
UCR81181.1 [GenBank]
Protein name
tail fiber protein host specificity
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,78
Protein sequence
MAVGGPWVGSSAVANTGQNWMGGAAQRLRMGIPFWMSNMNGRSVEVIHTLGGDHNFNGQWFRDRCFEAGSAPIVFNLTDTLVSYTRDVPLFFMYGDTPNEYVQLNIGGGVHIWGRGGQGGWTHSGGDGNGQLGGTCIVNDIGGRLRINNGGVICGGGGGGGGIAYRPHSGANWQDIGGGGGRPFGPGGGGGYSGGGASLDSPGGGYQYGNAHSGQGGDAGGAGQNAWSDGGKVLKVGAGGGAGAAVAGSSPTWHNTGVIYGSWL
Physico‐chemical
properties
protein length:264 AA
molecular weight: 26404,62190 Da
isoelectric point:6,63455
aromaticity:0,09848
hydropathy:-0,26326

Domains

Domains [InterPro]
IPR048291
ATT
1–39
IPR048291 IPR007932
DC_2135
STR
1–139
DC_2135
UCR81181.1
1 264
Architecture
ATT
STR
RBD
ATT 1-39 | STR 40-139 | RBD 140-264
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage PSD2002
[NCBI] 		2880953 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UCR81181.1 [NCBI]
Genbank nucleotide accession
OK335775.1 [NCBI]
CDS location
range 32287 -> 33081
strand -
CDS
ATGGCAGTTGGAGGACCGTGGGTAGGATCGTCTGCAGTAGCTAATACAGGACAAAATTGGATGGGCGGCGCCGCCCAGCGATTGAGAATGGGTATTCCGTTTTGGATGAGTAATATGAACGGTCGGTCTGTTGAAGTAATTCATACTTTAGGTGGGGACCATAACTTTAATGGGCAATGGTTCCGCGACCGTTGCTTTGAAGCCGGTAGTGCGCCTATTGTGTTTAATCTTACAGATACATTAGTATCTTATACCCGTGATGTTCCATTGTTCTTTATGTATGGGGATACTCCAAACGAATATGTTCAATTGAATATTGGTGGTGGGGTTCATATATGGGGCCGAGGTGGTCAAGGTGGATGGACCCACTCGGGCGGCGATGGCAACGGCCAATTGGGTGGAACTTGTATTGTAAATGATATTGGCGGTCGTTTAAGAATTAATAATGGTGGGGTTATCTGCGGCGGTGGCGGTGGCGGCGGTGGTATCGCTTATCGTCCTCACTCTGGTGCAAACTGGCAAGATATTGGCGGTGGTGGAGGAAGACCATTTGGCCCAGGCGGTGGTGGTGGATATTCAGGTGGCGGAGCTTCTTTGGATAGTCCAGGAGGTGGTTATCAATACGGAAATGCTCACTCTGGTCAGGGTGGCGATGCTGGCGGCGCAGGTCAGAATGCATGGTCTGATGGTGGTAAAGTTCTAAAAGTCGGCGCTGGTGGCGGCGCAGGAGCTGCTGTTGCTGGAAGTTCTCCTACTTGGCATAATACAGGTGTTATCTACGGTTCCTGGCTATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
1febb21ab3e54452d8487c9dcf541301882eed60bd05875f8629e7b2c061f1e5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8275
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Phages are superior to antibiotics on the recovery when treating E. coli O157:H7 infections Wang,Y., Subedi,D. and Tang,F. 2024-01 — GenBank