Protein

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Genbank accession
XAG93327.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MDQDTKTIIQYPTSGDEYDIPFDYLSRKFVRVSLVSDTQRLLLDNITDYRYVSRTRVKLLVSTDGYSRVEIRRFTSASEMVVDFSDGSVLRATDLNVSALQSAHIAEEARDLFSTSLSIGQLRYFDAKGLQIKNVAAGVDNTDAVTVQQLNKITADVVTTIPDSVADNIRGLWARVLGDIGITLVDGSFETGATITTRTQALWSISGRKCYTWAGALPKVVPENSTPESTGGISETAWVDSSSKALGVLLAGPSGAERVGLKQGGTVQDAINWLTFDSFDIVKDGSKDVTADIMAACVVANDLGLDIKQNDGTYLVSGNPVWPVYNSLDLNGVTLKLAAGFTGYFALTQKDSTTVYGPTSPIVQAINAAGGRTAGSGVLEGLVNSTELNGKFLFMEGADVLYYSRGTAKYWWTNTYLSNRGKLSDNLKYGVSAITKITAVTPRTKIVYYRLPNLDFGNGPANNGVIRVLNNTRFIMQGGSISNRPLKDVSKSPVIISLNYCAAFKAYDFFDPYPAFAVNANNSLVYSYTLNFNDIADAVFENFNSQGYGWGVVGGERSTNITYRDCNLNRVDMHDPYMGYLKVLDTRLGTWGINASGMGDMYLERVTVDLDDSAHGGYREHEGIINARGDFGGFHDGGLYIKDLTIVGEASAFEAASGNPVALVSAYSFNASLAYIPESSPVTPWGFKEVIVEGLHCPFKRTGRRFNSIISAPSIQFTVYHPMRVKLEDCNFNSTAFERFDLRGWRVTPYNPSKVGIANTLAFRPTNFVDVKDCSMVGLEFTRPLRSYDYSNFDVNLVNVKNVEEHSLSPFTLYTNQCGRYNLVGCGLQQIVDKSMTTGERANSRSTFSVTGGTWNSLTGNPTDITYGNGYDIPVVATGVMFVGPYSQTEVTDANLNVAEFVQASGCKFLSSGPTYIQPLLWSGAGGPTGASANFNVARGNTLGLKISAVKGKTSQTLAATLMIPQGFSTDHASGTTYGFSVAKNVNYQLSLNARGLKANVGLVRCSDTITGVYLNA
Physico‐chemical
properties
protein length:1017 AA
molecular weight: 110277,60250 Da
isoelectric point:5,78100
aromaticity:0,10324
hydropathy:-0,11662

Domains

Domains [InterPro]
DC_0778
STR
1–682
DC_0778 DC_1183
IPR005604
ATT
6–121
IPR005604 IPR011049 G3DSA:2.10.10.80
IPR011049
STR
79–176
IPR011049 IPR040775
IPR008635
RBD
131–161
IPR008635
XAG93327.1
1 1017
Architecture
ATT
STR
ATT
STR
RBD
ATT 1-121 | STR 122-181 | ATT 182-241 | STR 242-682 | RBD 698-994 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XAG93327.1
1 1017
Domain Start End Length (AA) Confidence
N-terminal 1 289 289 0,9952
Central domain 290 912 624 0,9946
C-terminal 913 1017 104 0,9872
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-289
Central
290-912
C-terminal
913-1017

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage p9676
[NCBI] 		3137354 Viruses >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XAG93327.1 [NCBI]
Genbank nucleotide accession
PP646059.1 [NCBI]
CDS location
range 31005 -> 34058
strand -
CDS
ATGGACCAAGATACTAAAACAATTATCCAATACCCCACCAGTGGTGACGAATACGATATCCCCTTCGACTACCTGTCGCGTAAGTTTGTCCGTGTGTCTCTCGTGTCGGATACCCAGCGTCTCTTGCTGGATAACATCACAGATTACCGGTACGTCTCCAGAACGCGCGTTAAACTACTGGTAAGTACCGATGGGTATAGTCGTGTAGAGATTCGACGCTTCACCTCTGCGTCCGAGATGGTCGTGGACTTCAGCGATGGGTCCGTTCTCCGCGCGACCGACCTTAACGTGTCCGCTCTACAGTCTGCACACATCGCAGAGGAGGCTCGTGACTTATTCAGCACATCCCTGAGCATTGGCCAACTTCGCTACTTTGACGCTAAAGGCTTGCAGATAAAGAATGTAGCAGCAGGTGTTGACAATACCGATGCAGTAACCGTTCAGCAGCTCAACAAGATAACCGCTGACGTCGTGACCACCATCCCTGACAGTGTGGCAGATAACATCCGGGGACTTTGGGCGCGAGTTTTAGGTGACATCGGAATCACGCTTGTTGACGGTAGCTTCGAGACTGGTGCAACCATTACTACCAGAACTCAAGCACTGTGGTCCATAAGTGGCCGTAAGTGCTATACATGGGCTGGTGCTCTGCCTAAGGTTGTCCCAGAGAACTCTACCCCAGAGTCTACAGGCGGTATTTCCGAAACGGCGTGGGTGGATAGTTCCTCCAAGGCCCTCGGTGTACTTTTGGCTGGACCATCTGGAGCTGAGCGCGTCGGTCTCAAGCAGGGCGGTACCGTTCAGGACGCCATTAATTGGTTGACGTTCGACTCCTTCGACATCGTAAAGGATGGTTCAAAAGATGTCACGGCAGACATTATGGCAGCCTGCGTTGTAGCCAACGACCTCGGGCTGGACATTAAGCAGAACGATGGGACATACCTAGTGTCTGGGAACCCTGTGTGGCCTGTGTACAACTCGCTTGACCTCAATGGGGTGACGCTGAAGTTGGCTGCTGGTTTCACTGGGTACTTTGCACTGACCCAGAAGGACTCCACAACGGTTTACGGGCCAACCAGTCCTATCGTTCAGGCCATCAATGCGGCTGGTGGGCGAACCGCTGGCTCTGGCGTTCTGGAAGGTCTGGTGAACTCTACCGAGCTGAATGGAAAGTTCCTGTTCATGGAGGGTGCCGATGTCCTTTATTATTCCCGAGGAACAGCTAAGTACTGGTGGACGAACACCTACCTGTCAAACCGTGGGAAACTGAGTGACAACCTTAAGTATGGCGTATCGGCTATCACGAAGATAACGGCAGTTACCCCTCGCACGAAGATTGTCTACTATCGTCTTCCTAATCTGGACTTTGGCAATGGCCCAGCGAACAACGGTGTGATTCGTGTACTGAACAACACCCGGTTCATTATGCAGGGTGGCTCAATCTCCAACCGCCCACTTAAGGATGTGTCAAAGAGTCCCGTCATAATCAGCCTCAACTACTGCGCAGCCTTCAAGGCGTACGACTTCTTCGACCCGTATCCGGCCTTTGCGGTGAACGCCAATAACTCGCTCGTCTACTCCTACACCCTGAACTTCAACGACATCGCTGACGCTGTGTTTGAGAACTTCAACTCGCAGGGGTACGGTTGGGGCGTGGTCGGCGGGGAGCGCTCTACCAATATAACCTATCGTGACTGCAACCTTAACAGGGTGGACATGCACGACCCTTACATGGGGTACCTGAAGGTGCTGGACACCCGCTTGGGTACTTGGGGCATCAATGCTTCGGGAATGGGCGATATGTACTTAGAGCGCGTCACGGTCGATTTGGATGATTCGGCACATGGTGGCTACCGCGAGCACGAAGGCATCATCAACGCCCGTGGTGACTTTGGCGGGTTCCACGATGGTGGTCTGTACATTAAGGACCTGACAATCGTCGGTGAGGCTTCCGCCTTCGAGGCAGCATCTGGGAACCCAGTGGCGCTGGTCTCTGCATACTCCTTCAACGCATCCCTTGCGTATATCCCTGAGTCTTCTCCGGTTACGCCGTGGGGCTTCAAGGAGGTAATCGTTGAGGGACTGCACTGCCCGTTCAAGCGGACTGGTCGTCGGTTCAACTCTATCATCTCCGCCCCAAGTATTCAGTTCACTGTGTATCACCCGATGCGGGTTAAACTGGAGGACTGTAACTTCAACTCTACGGCGTTCGAGAGGTTCGACCTTAGGGGCTGGAGGGTTACTCCGTACAACCCCTCGAAGGTTGGTATCGCGAACACTCTGGCATTCCGTCCTACGAACTTTGTTGATGTGAAGGACTGCTCGATGGTTGGCCTTGAGTTTACCAGACCACTGCGCTCCTACGATTACTCTAACTTTGACGTAAACCTCGTTAACGTTAAGAACGTAGAGGAGCACTCCCTGTCGCCGTTCACTCTGTACACTAACCAGTGTGGTCGTTATAACTTGGTTGGGTGCGGTCTGCAACAGATTGTGGACAAGTCGATGACCACTGGTGAGCGTGCAAACAGTAGGAGCACGTTCTCGGTGACTGGTGGTACTTGGAACTCACTTACCGGAAACCCTACGGATATAACCTATGGTAACGGCTATGACATCCCTGTGGTGGCGACTGGCGTTATGTTCGTTGGTCCGTACTCCCAGACTGAAGTGACAGACGCAAACTTGAACGTTGCGGAGTTCGTTCAGGCATCCGGGTGCAAGTTCCTCAGTTCCGGCCCGACCTACATCCAGCCGTTACTCTGGAGTGGGGCAGGTGGTCCAACTGGAGCGAGTGCTAACTTCAACGTGGCACGCGGGAACACTCTGGGGCTGAAAATCTCCGCAGTAAAGGGTAAGACGTCTCAGACACTGGCAGCGACTCTGATGATTCCACAAGGGTTCTCAACTGACCATGCTTCAGGCACAACCTACGGGTTCTCAGTGGCGAAGAATGTAAACTACCAATTGAGTCTCAACGCCCGCGGCTTGAAGGCGAACGTGGGTCTGGTTCGGTGCAGTGACACCATTACCGGTGTTTACCTAAACGCCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8f4063d75a293919bd7e8f00567d975dca0fcc86f9a5447dd80e61bd76dbf789
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8202
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization and Therapeutic Efficacy of Phage p9676 Against Epidemic ST11 KL64 Klebsiella pneumoniae: Insights from Genomic Analysis and In Vivo Studies Du,H. and Zhao,Y. — — GenBank