Protein

View in Explore
Genbank accession
YP_010069544.1 [GenBank]
Protein name
tail fiber protein; host specificity
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MAIVGVPGWIGESAVNETGQRWMDAAMRAVRVSVPGWMSSMAGKSVEKAYSIGSNHSYNKDTLINWLKSIGTAPAVVTITGDIVSSSSTIPCLDFPSSLTNEYVTLIINSGVTVYGRGGNGSGSSGGSGGALVQATAGGTAINNGIGARLRITNNGAIAGGGGGGGGWSADYNFTLRNVAGGGGGRPFGTGGRGGRGNGGNASLTAAGGKVTVDGNNMSGAGGNVGAAGGAAVRTSNYNTSGAGAAGKAVTGNAPTWTKVGTIYGSRV
Physico‐chemical
properties
protein length:268 AA
molecular weight: 26068,55390 Da
isoelectric point:9,99687
aromaticity:0,05970
hydropathy:-0,05112

Domains

Domains [InterPro]
IPR048291
ATT
1–42
IPR048291 IPR007932
DC_2135
STR
1–141
DC_2135
YP_010069544.1
1 268
Architecture
ATT
STR
RBD
ATT 1-42 | STR 43-141 | RBD 142-268
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoM_G8
[NCBI] 		2508179 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Tequatrovirus
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010069544.1 [NCBI]
Genbank nucleotide accession
NC_054915.1 [NCBI]
CDS location
range 159659 -> 160465
strand +
CDS
ATGGCAATTGTAGGTGTTCCTGGCTGGATTGGTGAATCTGCCGTGAATGAAACTGGACAACGTTGGATGGATGCTGCGATGAGAGCTGTTCGTGTTTCAGTTCCCGGTTGGATGAGTTCAATGGCAGGAAAGTCAGTTGAAAAAGCTTATTCAATTGGCTCAAATCATTCATATAATAAAGATACTTTAATTAATTGGCTTAAATCAATTGGAACAGCTCCTGCTGTTGTAACAATAACAGGAGATATTGTTTCTAGTTCTTCAACTATTCCGTGCTTAGATTTTCCTAGTTCATTAACCAATGAATATGTGACATTGATTATTAACTCTGGCGTTACTGTTTACGGCCGAGGAGGTAATGGGTCTGGATCTAGTGGAGGTTCTGGAGGCGCTTTAGTTCAAGCAACTGCTGGTGGTACGGCGATTAATAATGGTATTGGTGCACGCTTACGTATTACGAATAATGGTGCAATTGCTGGCGGCGGCGGCGGCGGCGGCGGTTGGTCCGCAGATTATAACTTCACATTACGTAATGTTGCTGGCGGCGGCGGCGGACGTCCTTTCGGTACTGGTGGTCGAGGTGGTCGAGGTAATGGTGGTAATGCATCGTTAACCGCCGCAGGTGGTAAAGTAACCGTTGATGGTAATAACATGAGTGGTGCTGGTGGTAACGTTGGTGCGGCTGGTGGTGCTGCCGTTCGTACATCAAACTATAATACCAGTGGTGCTGGTGCTGCTGGTAAAGCTGTTACTGGTAATGCTCCAACTTGGACTAAAGTTGGTACAATATACGGTTCAAGAGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c613e6533c3cf815578c37896a6b337728a7a25b1b24dd7c8836d7c2a144c3ef
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7668
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Still something new to discover - new insights into E. coli phage diversity and taxonomy Korf,I.H.E., Adriaennsens,E., Dreiseikelmann,B., Kropinski,A., Nimtz,M., Meier-Kolthoff,J.P., Rohde,M., van Raaij,M. and Wittmann,J. 2019-05-17 — GenBank