Protein

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Genbank accession
XPK43583.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,92
Protein sequence
MPTLINRPFAQSGDVSVVPDASPSGYVNFQRGYTPDYALALEAGNVAAKAVERESMNWLLNLITDNLMFIQDHGAQQYFSSDLKPDGYPKNAIVVSNSGTPSAPEWRIFQSVVDGNTSAVPANGETESWQELTLPSEARKYIPMPAGGDAQNPYFVRGLISNFVDFDNITTSTTIVIQSDAVAALCSNIPNAVGATKVAGRLQVCAWQVDAQTFALQQYTSMNGYVFTRSYTSGAWSAWIQNATVQDVQIGTPNLASGKGAQDIILTVPAGYAWPPSAGSRLTIVNDVTTTGPVTVTIGANKVAVLGFDGGELPAGSIVGLLPFTIIYDGTVWRLLQAFGAAQIGVDASEPQQFVTKRQLDDLASKLITMGDVFEVGETRFLTNGTNPNTKLGAYGQVWTRLPDNMVIRTSGTARNGLATGGADSVTLTAAMLPLHNHSVNITTRQSGPWSNTTGDAGNHNHTGDTSQNGAHVHGMDSAGNHHHDSSWGEANTNDARYGVYDNTHNNFGSRKGGDWDNYKYNTSTNGNHVHNIQSSGSHTHGLNINYAGNHSHSYTLPAHTHDVVGNTGNAGQSVPTAVSTLPRYVVLNGWYRSA
Physico‐chemical
properties
protein length:595 AA
molecular weight: 63491,26120 Da
isoelectric point:5,68722
aromaticity:0,08571
hydropathy:-0,30286

Domains

Domains [InterPro]
DC_0930
STR
1–380
DC_0930 DC_0348
cd19958
STR
157–241
cd19958
XPK43583.1
1 595
Architecture
STR
RBD
STR 1-380 | RBD 485-595
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage VerenaGrendelmeier_Bas101
[NCBI] 		3398438 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XPK43583.1 [NCBI]
Genbank nucleotide accession
PQ850631 [NCBI]
CDS location
range 26076 -> 27863
strand +
CDS
ATGCCAACACTTATTAACAGACCTTTCGCGCAAAGCGGTGATGTATCCGTGGTGCCGGATGCAAGTCCAAGCGGTTATGTGAACTTCCAGCGCGGCTACACCCCTGACTATGCACTTGCGCTGGAAGCCGGAAACGTAGCCGCGAAAGCAGTTGAACGTGAGTCGATGAACTGGTTGCTGAATCTGATCACCGACAACCTTATGTTCATACAGGACCACGGCGCTCAACAGTATTTCTCGTCTGACTTGAAGCCAGATGGATACCCGAAAAATGCCATCGTTGTCAGCAACTCTGGCACCCCTTCAGCGCCTGAATGGCGCATTTTCCAGAGTGTGGTAGACGGCAACACCAGCGCAGTCCCAGCTAACGGCGAAACGGAATCTTGGCAGGAATTGACGCTGCCTAGCGAAGCGAGAAAATATATTCCTATGCCTGCTGGCGGCGATGCGCAAAACCCGTATTTTGTTCGCGGACTGATTTCAAACTTTGTGGACTTTGATAATATCACGACTTCCACAACTATTGTCATTCAATCTGATGCCGTTGCCGCTCTCTGCTCTAACATCCCGAATGCGGTTGGTGCGACGAAGGTTGCAGGACGTCTCCAGGTTTGCGCTTGGCAGGTTGATGCGCAGACTTTCGCCCTGCAACAATACACGTCAATGAACGGATATGTTTTCACCCGCTCTTATACGTCTGGTGCTTGGAGTGCTTGGATTCAAAATGCAACTGTTCAAGACGTGCAAATCGGCACGCCGAATCTTGCATCAGGTAAAGGCGCACAAGATATAATCCTTACCGTTCCGGCAGGTTATGCATGGCCGCCGTCAGCAGGTAGTCGCCTGACAATTGTCAATGATGTAACGACTACCGGACCTGTTACCGTGACCATTGGTGCAAACAAGGTTGCCGTCCTTGGATTCGACGGCGGCGAGTTGCCAGCAGGGTCCATCGTCGGTCTGCTGCCTTTCACCATTATTTATGACGGAACAGTCTGGCGTCTTCTTCAAGCATTCGGCGCGGCGCAAATCGGTGTTGATGCTAGTGAGCCGCAACAGTTTGTGACAAAGCGTCAACTCGATGATTTGGCTTCTAAGTTGATCACTATGGGTGATGTATTCGAAGTCGGTGAGACTCGATTCTTGACTAATGGCACCAACCCAAACACCAAGCTTGGCGCTTATGGACAGGTGTGGACCAGATTGCCTGATAACATGGTCATCAGAACATCCGGCACGGCACGAAACGGTCTTGCCACTGGCGGCGCGGACTCCGTCACCCTTACCGCCGCCATGCTTCCTCTGCACAATCACAGCGTGAACATTACTACGCGACAAAGCGGTCCATGGTCAAATACCACTGGAGATGCGGGCAACCATAACCACACAGGCGATACCAGTCAAAACGGTGCTCACGTGCACGGAATGGATTCGGCAGGCAACCACCACCATGACAGTAGCTGGGGTGAGGCGAATACGAATGATGCGCGGTATGGCGTGTATGACAATACGCACAACAACTTCGGCAGTCGAAAGGGCGGCGACTGGGATAACTACAAATACAACACCTCGACTAACGGCAACCACGTCCACAATATCCAATCTTCTGGGTCACACACCCATGGGTTGAATATAAATTACGCTGGCAATCACAGCCATAGCTATACCCTTCCCGCTCACACTCACGATGTGGTCGGTAACACTGGCAACGCAGGGCAGTCTGTTCCAACGGCTGTCTCAACCCTGCCGCGATATGTCGTCTTGAACGGCTGGTACAGAAGCGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1f0a840cc0ce8095259577c64060be15d4385f32dcf9106f7fa7d5c991a8d5cb
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7257
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequences of Escherichia coli phages Huey, Dewey, and Louie Maffei,E., Willi,L. and Harms,A. — — GenBank