Protein

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Genbank accession
YP_010077980.1 [GenBank]
Protein name
repeat-containing tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MSKIWEPSGGVDDKVLFGMYPEDLDAQDRQELYAEAFEDIVKSYSTMATACRYQAIIDEMIDDETRAQLIADTQAAMEAVSVARTAMDSISQSATAMDPISVSDVAMDAVWESQIARDIVLEVSMAAGKFVASLADLYGPDYADIDDVATDQDAMDAVSVSAVAMEAVAASQIAMDAVVAATDVALPTVVETETAMNEVSLSDLALDTLWASSAAWDLIKANAMAVGKFAVGRAGLSGYDYADIDSVAASQTAMDAVSTSQTAMDAVSTSQTAMDAVSTSQTAMDAVSASTLAMDAIWDSQLAWDTVAAVSMAVGKFVAGRAGLDGSNYGDIEAVASDQTAMDSVAGSETAMDAVAGSETAMDAVAESTIARTAVIGSSFAIDTLWSVATGSETWLDGYQVQSGGGYQSLVSGPTDNGSAVEMDIQSTSATSTRGWTIDPENYGTLEWKDRVPDSNYYDGYTYIRVKIDGDTIHSKTYGNSTQSSWTSRSVDISSYSAESNLVLEADTSEGYDQVTITAQFGDIILS
Physico‐chemical
properties
protein length:527 AA
molecular weight: 55340,17480 Da
isoelectric point:4,05003
aromaticity:0,07021
hydropathy:0,00626

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Halobacterium phage ChaoS9
[NCBI] 		2847105 Uroviricota > Caudoviricetes > Vertoviridae > Chaovirus bigenum > Chaovirus ChaoS9
Host Halobacterium salinarum strain S9
[NCBI] 		1601833 Bacillota > Bacilli > Caryophanales > Bacillaceae > Salipaludibacillus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010077980.1 [NCBI]
Genbank nucleotide accession
NC_054953.1 [NCBI]
CDS location
range 23115 -> 24698
strand +
CDS
ATGAGTAAAATCTGGGAGCCGAGCGGTGGCGTCGACGATAAGGTCCTCTTCGGGATGTACCCCGAGGACCTCGACGCCCAGGATCGACAAGAACTGTACGCAGAAGCGTTCGAGGACATCGTCAAGTCCTACTCGACGATGGCGACCGCCTGCCGGTACCAGGCGATCATCGACGAGATGATCGACGACGAGACGCGAGCGCAGCTGATCGCAGACACGCAGGCGGCGATGGAAGCGGTCAGCGTCGCTCGGACTGCGATGGACTCGATCAGCCAGTCGGCCACGGCTATGGATCCGATCAGCGTGTCCGACGTCGCGATGGACGCAGTCTGGGAGAGCCAGATAGCTCGAGATATCGTCTTAGAAGTCTCGATGGCGGCTGGGAAGTTCGTAGCCAGCCTCGCTGACCTCTACGGTCCCGACTACGCCGACATCGATGACGTTGCGACCGATCAGGACGCGATGGATGCGGTGAGCGTCTCCGCCGTCGCGATGGAGGCAGTCGCCGCATCCCAGATTGCGATGGATGCAGTCGTCGCCGCGACCGACGTTGCCCTACCGACAGTTGTCGAAACTGAGACGGCGATGAACGAGGTCAGTCTCTCCGACCTCGCCCTCGATACCCTCTGGGCGAGCAGCGCTGCCTGGGACCTCATCAAGGCCAACGCGATGGCGGTCGGGAAGTTCGCTGTCGGCCGAGCAGGCCTCAGCGGCTATGACTACGCCGATATCGACTCCGTCGCCGCTTCACAAACCGCGATGGACGCGGTAAGTACGTCGCAGACGGCCATGGACGCGGTAAGTACGTCGCAGACGGCCATGGACGCGGTAAGTACGTCGCAGACGGCCATGGACGCGGTAAGTGCCTCCACCCTCGCGATGGATGCGATCTGGGATTCCCAGCTCGCCTGGGACACCGTTGCTGCCGTCTCGATGGCGGTTGGAAAGTTCGTAGCCGGCAGAGCGGGCCTGGACGGCTCGAATTACGGCGATATCGAAGCTGTCGCGTCTGATCAGACCGCGATGGACTCGGTGGCGGGCTCCGAGACCGCGATGGATGCGGTGGCGGGCTCCGAGACCGCGATGGACGCGGTGGCGGAGTCCACAATCGCCCGTACTGCCGTGATCGGGAGTTCCTTTGCTATCGATACGCTGTGGTCGGTGGCAACCGGGTCTGAGACGTGGCTGGACGGATATCAGGTTCAGTCGGGAGGCGGCTACCAAAGTCTCGTCAGTGGGCCAACGGATAACGGGAGTGCGGTCGAGATGGACATCCAGAGTACGTCAGCGACGTCGACGAGAGGCTGGACGATCGATCCTGAGAACTACGGCACGCTCGAATGGAAAGATCGAGTCCCTGATTCGAACTACTACGACGGGTATACCTACATCCGCGTAAAGATCGACGGGGATACCATCCACTCAAAAACGTACGGAAACAGCACGCAGTCGAGTTGGACGAGCCGGTCAGTCGATATCAGCAGCTATTCTGCTGAAAGCAACCTCGTCCTCGAAGCAGACACATCCGAGGGCTACGATCAGGTAACAATCACGGCACAGTTCGGCGATATCATACTCTCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
68b17195264e1dc79016ebe26d05c9dca30c30df184df7497e45079183d46451
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7135
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Halobacterium salinarum virus ChaoS9, a Novel Halovirus Related to PhiH1 and PhiCh1 Dyall-Smith,M., Palm,P., Wanner,G., Witte,A., Oesterhelt,D. and Pfeiffer,F. 2019 30832293 GenBank