Protein

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UniProt accession
A0A8S5NMD2 [UniProt]
Protein name
Collagen triple helix repeat protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,75
Protein sequence
MAKYLVGNIKGPKGDTGAIGPQGPTGARGATGATGPQGPKGDAGATGPQGPTGKQGATGPTGPAGSQGPQGIQGPKGPTGPQGPMGPQGPSGGEIKDTRNDNQPPSWYMKNHPKKTVVEFKTAKTIGLSAGETFATLVTFVQWSYSAGGYPKQVAMSGDDIWWRRGESNSSWTAWQHILDTLDPNTVWTMAHRVGEYLETNSSFDPNNISGTWVRAPSIGPHTWLRTK
Physico‐chemical
properties
protein length:228 AA
molecular weight: 23806,15470 Da
isoelectric point:9,55036
aromaticity:0,07895
hydropathy:-0,74035

Domains

Domains [InterPro]
DC_0620
STR
5–224
DC_0620
PTHR24637
Unmapped
11–93
PTHR24637
IPR008160
STR
11–63
IPR008160
A0A8S5NMD2
1 228
Architecture
STR
STR 5-224 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Siphoviridae sp. ctFbs2
[NCBI] 		2826213 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAD95524.1 [NCBI]
Genbank nucleotide accession
BK015193 [NCBI]
CDS location
range 21614 -> 22300
strand -
CDS
ATGGCAAAATACCTTGTAGGTAACATCAAGGGCCCCAAGGGTGATACTGGTGCGATAGGACCACAAGGGCCCACCGGCGCGCGAGGCGCTACGGGGGCTACTGGCCCGCAGGGTCCGAAAGGCGACGCGGGCGCGACAGGACCGCAAGGGCCAACGGGCAAGCAGGGGGCGACAGGCCCCACTGGCCCCGCGGGCTCGCAAGGACCGCAGGGCATCCAGGGGCCTAAAGGCCCGACAGGCCCGCAAGGGCCGATGGGCCCGCAGGGGCCAAGCGGCGGCGAGATCAAGGACACGAGGAACGACAACCAGCCGCCGAGCTGGTATATGAAGAACCACCCGAAGAAGACTGTGGTCGAGTTCAAGACAGCGAAAACCATAGGGCTTTCGGCCGGCGAAACCTTCGCGACCCTCGTCACCTTCGTGCAATGGAGCTACAGTGCCGGCGGGTACCCGAAGCAGGTCGCTATGAGCGGCGACGACATATGGTGGCGGCGCGGCGAGTCGAACTCTTCGTGGACGGCGTGGCAGCACATCCTCGATACCCTCGACCCGAACACGGTGTGGACCATGGCCCATCGTGTCGGCGAGTACTTGGAGACGAACAGCTCGTTTGACCCGAACAACATCAGTGGTACATGGGTGCGGGCACCGAGTATCGGGCCGCACACGTGGCTGAGGACCAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d53437c718a3a88b3009ebf671f3972684cc48d9dd67ae2b028c42e40b5e0402
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7264
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50