Protein

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Genbank accession
YP_009850038.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSNRPLDRDSMYFNLGDATAKIVEHLLSLEKDVTDLKGTNVGDLKAVIDKLTGQVDSQELNAKYPPVPLVGLTGSGDETATLDNILSFAKTNKYSKVFIPKGTYTVKYVKYRDGISIQGAGLEKTIIKALASTEKHFMQSVDSPTQQLIISDLSINGNLVNAGQNGLGLIAYPLSVSPYHGGVWYSVFRNLRIEKFKGAQIIITKGADELAPASLPNQFNIFENIQAYRAAEATSYCLYMENQIGQHTFRNCGFDCPTNGVATPGTNIYIDGGNTILFDMVTSQNSEKVYDIKNNLNTTIRNGWIENSKYAITTYKANNLNIEQVNFANACSDGSGGGYGVKSTDTTDSIVVKECNFRGNVETSIWGNGQSFEIKSLNNKGTLVVKGIIRQISAVDNLSLSNAKFVYLSNQSATVNTLNHNSVSGELITVKFHGPGTTTITNSGNIKLPNGVTSIIFQSGDTATFTPTELESGLMLVAHNRVTPVANKVTSLPTADVNQRGRIIRTEGGTGVADAVYICIKKADDTYDWAQLY
Physico‐chemical
properties
protein length:533 AA
molecular weight: 57795,39610 Da
isoelectric point:6,41300
aromaticity:0,08068
hydropathy:-0,22214

Domains

Domains [InterPro]
IPR012334
STR
70–447
IPR012334
IPR011050
STR
75–402
IPR011050
YP_009850038.1
1 533
Architecture
STR
STR 70-447 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009850038.1
1 533
Domain Start End Length (AA) Confidence
N-terminal 1 80 80 0,9839
Central domain 81 382 303 0,9900
C-terminal 383 533 150 0,9876
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-80
Central
81-382
C-terminal
383-533

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacillus phage vB_BmeM-Goe8
[NCBI] 		2593638 Uroviricota > Caudoviricetes > Herelleviridae > Goettingenvirus > Goettingenvirus goe8
Host Bacillus megaterium DSM 319
[NCBI] 		592022 Bacillota > Bacilli > Caryophanales > Bacillaceae > Priestia > Priestia megaterium

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009850038.1 [NCBI]
Genbank nucleotide accession
NC_048797.1 [NCBI]
CDS location
range 71258 -> 72859
strand +
CDS
ATGTCAAATAGACCTCTTGATAGAGATAGTATGTATTTTAACTTAGGAGACGCTACCGCTAAAATTGTTGAGCACTTACTAAGCTTAGAGAAAGATGTAACTGACTTAAAAGGAACTAACGTTGGTGATTTAAAAGCCGTTATTGATAAGCTCACCGGTCAGGTAGACAGCCAAGAGTTAAATGCTAAATACCCTCCTGTTCCTCTAGTAGGTTTAACAGGGAGCGGAGATGAGACAGCTACGCTAGACAATATCCTATCGTTCGCTAAAACTAACAAATACAGCAAAGTGTTTATTCCAAAAGGTACATATACAGTTAAGTATGTTAAATACCGTGATGGGATTTCTATTCAAGGCGCTGGGTTAGAGAAAACAATTATTAAAGCTCTAGCAAGTACCGAGAAACATTTTATGCAAAGTGTAGATTCTCCTACACAACAGCTTATTATTTCTGACTTGTCTATCAACGGTAACCTAGTGAATGCAGGTCAAAACGGTTTAGGCTTAATTGCTTACCCATTAAGCGTATCTCCGTATCACGGCGGAGTTTGGTATTCTGTTTTCCGTAACCTTCGTATTGAGAAGTTTAAAGGGGCACAGATCATCATTACTAAAGGTGCAGACGAATTAGCTCCTGCATCATTACCGAACCAGTTTAATATTTTTGAAAACATTCAAGCTTACCGTGCAGCAGAAGCAACTAGTTACTGTTTATACATGGAAAACCAAATCGGTCAACATACGTTCCGTAACTGTGGATTTGACTGTCCTACAAATGGTGTAGCAACTCCGGGTACTAACATCTACATCGATGGCGGTAACACAATTTTATTTGATATGGTAACATCTCAAAATAGTGAGAAAGTTTACGATATTAAAAACAACCTAAATACTACAATCCGAAACGGATGGATTGAAAACTCTAAATACGCTATTACAACTTACAAGGCTAATAACTTGAACATTGAGCAAGTCAACTTTGCTAATGCGTGTTCAGACGGTAGCGGCGGAGGATATGGTGTTAAGAGTACAGATACAACAGATAGTATTGTTGTCAAAGAGTGTAACTTCCGAGGTAACGTAGAAACGTCAATTTGGGGTAACGGTCAGAGCTTTGAAATTAAATCGCTTAATAACAAAGGGACACTGGTTGTTAAGGGAATTATTCGTCAGATTTCAGCAGTAGACAACTTAAGTCTTTCTAATGCTAAGTTTGTGTATCTATCTAACCAGAGTGCTACAGTAAATACTCTTAATCATAACTCAGTATCAGGAGAGTTAATTACTGTTAAGTTTCATGGACCCGGAACAACTACGATTACAAACTCAGGGAATATTAAACTTCCTAACGGAGTAACAAGCATTATATTCCAATCAGGTGATACAGCTACCTTTACTCCTACCGAGCTAGAAAGTGGGTTAATGTTAGTAGCACATAACCGTGTGACTCCTGTAGCAAATAAGGTGACATCATTACCGACAGCCGATGTTAACCAACGAGGAAGAATTATTCGGACTGAGGGCGGAACAGGTGTAGCAGATGCAGTCTATATCTGTATTAAAAAAGCAGACGATACTTACGATTGGGCGCAGCTCTATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
90065c61328b922cde87cd47b14e7261cd5cf186d68b80b0941c1dc3563edf6a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7958
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50