Protein

View in Explore
Genbank accession
XQQ55608.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,87
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MGTSLNELKTGREKLEIINQVLARINSISEAIDNTRLDEVVGLKQACESLKNECLKFKNDIVDKNDDILSKYDDINKKYSNISEKYNNVNAKFDYIKEAYEDFSLNKQEIQNIKDFLENNTEEFENLKKDIQKYEEIKFNLDNYINEIKQNKDFVKEYFDLNTKIKDEILSELNHALEIVDSLHLNVDELKEIKPELISIKKEVKDLSNEAKLVVSEASEIIKNKINTIFFENQRLNQEMIDSVKKLEEIKIDIGVKYKEIASAYELLLESKQNIEDLREVIALYKEFENDITSYSQIIKDFKSKIENLERDLKSQSESIYSSLNDKQNEILKNLNEVKNEALVKFDELTAKCEGYKIHFEQSYDRFNQRALIANEDLGRLAEVAKKELGNDKLIYETELKVLAEETIKQMEEMLKGLSDERNEVTEVFETQKKEFTTLVDTSKVMIDNLNHIFNANYQAKKNEFSIIFNEKLHSLNENKQDFLNELVSAKENGLNKINETKEQSLNEIIQTKEQGLNELETKKGECIDEIDNQARIYDISGVKANVEYLLSLLNEKDDGKDDGIKDEIANIEQGIKDKEQELEEIKKQIEEALNNNDELKQKNEELKEIKNQIDEALSQEPPADTSELEERKEELENQIAELEKEIAGELINKKEEIEKELEEANQNLEDKNNELEQNEKDKKLITQKVLDITIKTLEALIDTKVSLNGDEEINGNKTFANPILVKVDPTNDNHLTNKIYVDTALNTKANLNGDNIFNGTNIFNKALTSPIDPTNDNHLTRKWYVDYGGGIKNLGTTGSINLDLRQAQHFILTANAGTSIGIANFGGVGKSGTITINNCQNVVAFNAPFKFRIAQSGFSSTETFAYFCIASNNVRLVRT
Physico‐chemical
properties
protein length:880 AA
molecular weight: 101025,97540 Da
isoelectric point:4,73931
aromaticity:0,06364
hydropathy:-0,72011

Domains

Domains [InterPro]
Coil
Unmapped
72–92
Coil Coil Coil Coil Coil Coil DC_1293 DC_0931
Coil
Unmapped
473–523
Coil Coil Coil
XQQ55608.1
1 880
Architecture
STR
RBD
STR 455-771 | RBD 822-878 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Campylobacter phage CC12667_12684_ph15
[NCBI] 		3410871 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Campylobacter coli
[NCBI] 		195 cellular organisms > Bacteria > Pseudomonadati > Campylobacterota > Epsilonproteobacteria > Campylobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XQQ55608.1 [NCBI]
Genbank nucleotide accession
PV052265.1 [NCBI]
CDS location
range 9133 -> 11775
strand +
CDS
ATGGGAACAAGCTTAAATGAATTAAAAACAGGTAGAGAAAAACTTGAAATCATAAATCAAGTTTTAGCTAGAATAAACAGCATTTCAGAAGCAATAGACAATACAAGACTTGATGAAGTTGTAGGCTTAAAACAAGCTTGCGAATCTTTAAAAAATGAATGTTTAAAATTTAAAAATGATATTGTAGATAAAAATGATGATATTTTAAGCAAATATGATGATATTAATAAAAAATATTCAAATATAAGTGAAAAATACAACAATGTAAATGCAAAATTTGATTATATTAAAGAAGCGTATGAAGATTTTTCTTTAAATAAACAAGAAATACAAAACATTAAAGATTTTTTAGAAAATAATACAGAAGAGTTTGAGAATTTAAAAAAAGATATACAGAAATATGAAGAAATAAAATTTAATTTAGATAATTATATTAATGAAATTAAACAAAATAAAGATTTTGTAAAAGAATATTTTGATTTGAACACAAAAATTAAAGATGAAATTTTAAGTGAACTTAATCATGCTTTAGAAATTGTAGATAGCTTACATTTAAATGTTGATGAATTAAAAGAAATAAAACCTGAATTAATAAGTATTAAAAAAGAAGTAAAAGATTTATCAAATGAAGCAAAATTAGTAGTAAGTGAAGCAAGCGAAATTATAAAAAATAAAATTAACACTATATTCTTTGAAAACCAAAGATTAAATCAAGAAATGATAGATAGTGTTAAAAAGCTAGAAGAAATTAAAATTGATATTGGAGTTAAATATAAAGAAATAGCTAGTGCATATGAACTACTTTTAGAAAGCAAGCAAAATATAGAAGATTTAAGAGAAGTTATAGCTTTATATAAAGAATTTGAAAATGATATAACATCTTATTCCCAAATTATAAAAGATTTTAAAAGTAAAATAGAAAATTTAGAACGAGATTTAAAATCACAGTCTGAAAGTATCTACTCTTCTTTAAATGATAAACAAAATGAAATATTAAAAAATTTAAATGAAGTAAAAAATGAAGCTTTAGTTAAATTTGATGAACTTACAGCAAAATGTGAAGGGTATAAAATACATTTTGAGCAAAGTTATGATAGGTTTAATCAAAGAGCTTTGATAGCTAATGAAGATTTAGGTAGGTTAGCTGAAGTTGCTAAAAAAGAACTAGGTAATGATAAGTTAATTTATGAAACAGAATTAAAAGTTTTAGCTGAAGAAACAATAAAACAAATGGAAGAAATGCTCAAAGGTTTAAGTGATGAAAGAAATGAAGTCACAGAGGTTTTTGAAACTCAAAAGAAAGAATTTACTACTCTTGTAGATACTTCTAAAGTTATGATTGACAACTTAAATCATATTTTTAATGCGAATTATCAAGCAAAGAAAAATGAGTTTAGTATTATTTTTAATGAAAAATTGCATAGTTTAAACGAGAATAAGCAAGATTTTTTAAATGAGCTTGTGAGCGCAAAAGAAAACGGACTCAATAAAATAAATGAAACAAAAGAGCAAAGCCTTAATGAAATAATCCAAACAAAAGAACAAGGACTTAATGAGCTTGAAACTAAAAAAGGTGAGTGCATAGATGAGATTGACAATCAAGCAAGAATCTATGATATAAGTGGTGTTAAGGCTAATGTTGAATATCTTCTTTCTTTGCTTAATGAGAAAGATGATGGTAAAGATGATGGAATTAAAGATGAAATTGCAAATATAGAGCAAGGTATAAAAGATAAAGAACAAGAGCTTGAAGAGATAAAAAAGCAAATTGAAGAAGCTTTAAATAATAATGATGAATTAAAGCAAAAAAATGAGGAATTAAAGGAAATTAAAAATCAAATCGATGAGGCTTTAAGTCAAGAACCACCTGCTGATACAAGCGAACTTGAAGAGAGAAAAGAAGAACTTGAAAATCAAATTGCTGAGCTTGAAAAAGAGATTGCTGGTGAATTAATTAACAAAAAAGAGGAAATTGAAAAAGAACTTGAAGAAGCTAATCAAAACTTAGAGGACAAAAACAATGAGTTAGAGCAAAATGAAAAAGATAAAAAGCTAATTACACAAAAAGTATTAGATATAACTATTAAAACTTTAGAAGCACTTATAGATACAAAAGTAAGTTTAAATGGCGATGAAGAGATAAATGGAAATAAAACTTTTGCTAATCCTATTTTAGTAAAAGTAGATCCAACTAATGATAACCATTTAACAAATAAAATCTATGTAGATACCGCTTTAAATACAAAAGCAAATTTAAATGGAGATAATATATTTAATGGCACAAATATTTTTAATAAGGCATTAACTTCTCCAATCGATCCAACAAATGATAATCACTTAACTAGAAAATGGTATGTAGATTATGGTGGTGGAATTAAAAATCTTGGCACAACTGGCAGTATAAATCTAGATTTAAGACAAGCTCAACATTTTATTTTAACAGCAAATGCAGGAACAAGCATAGGAATAGCTAATTTTGGAGGAGTAGGAAAAAGCGGAACAATAACCATAAATAATTGTCAAAATGTAGTAGCTTTTAATGCCCCTTTTAAATTTAGAATAGCTCAAAGTGGATTTAGTAGCACTGAAACTTTTGCTTATTTTTGCATAGCTTCGAATAATGTAAGATTAGTAAGGACTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
cac31de6bf92ee2548a8cd0586e557a4391c7c6672bed4c7d6754d367acc5b16
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6287
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Campylobacter and Salmonella phages isolated in the United Kingdom Mutai,I.J., Gurusinghe,A., Clarke,M., Wang,B., Connerton,P. and Bhandare,S.G. 2021-12-15 — GenBank