Protein

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Genbank accession
USW07480.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,87
TF
Evidence RBPdetect2
Probability 0,82
Protein sequence
MADLKVGSTTGGSVIWHQGNFPLNPAGDDVLYKSYKIYSEYNKPQAADNDFVSKAKGGTGSQGFQKEVEFKEGVKISATFSGGSNLNGLYSGNGDGAAREKANMDLRSWYGIGIWNSCTGDGIQGRTIWFNARRGTIETVGDIVSGRQVVSNVSVPTSPGHLTRKDYVDGAINTVTTNANSRVLRSGDTMTGNLTAPNLFSQNPASQPSHVPRFDQIVIKDSVQDFGYY
Physico‐chemical
properties
protein length:229 AA
molecular weight: 24616,88580 Da
isoelectric point:7,79424
aromaticity:0,09607
hydropathy:-0,49476

Domains

Domains [InterPro]
DC_0466
STR
1–227
DC_0466
IPR005601
STR
85–203
IPR005601
USW07480.1
1 229
Architecture
STR
STR 1-227 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
USW07480.1
1 229
Domain Start End Length (AA) Confidence
N-terminal 1 204 204 0,3354
Central domain 205 218 15 0,0694
C-terminal 219 229 10 0,9334
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-204
Central
205-218
C-terminal
219-229

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage GRNsp7
[NCBI] 		2959431 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enteritidis
[NCBI] 		149539 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
USW07480.1 [NCBI]
Genbank nucleotide accession
ON720975.1 [NCBI]
CDS location
range 131024 -> 131713
strand -
CDS
ATGGCTGATTTAAAAGTAGGTTCAACAACTGGAGGCTCTGTCATTTGGCATCAAGGAAATTTTCCATTGAATCCGGCCGGTGACGATGTACTCTATAAATCGTATAAAATATATTCAGAATATAATAAACCGCAGGCAGCTGATAACGATTTCGTTTCTAAAGCAAAAGGCGGCACAGGTTCTCAAGGTTTCCAAAAAGAAGTAGAATTTAAAGAAGGTGTTAAGATTTCTGCAACGTTTTCTGGCGGTTCAAACCTGAATGGTTTATATTCTGGCAATGGAGATGGAGCTGCCAGAGAAAAAGCTAACATGGATTTACGTTCATGGTACGGCATTGGTATTTGGAACTCATGTACAGGTGATGGGATCCAGGGACGCACAATCTGGTTTAATGCCAGACGTGGTACAATTGAAACAGTTGGAGATATTGTTTCGGGTCGACAAGTTGTTTCTAATGTTTCAGTACCGACCAGCCCGGGACACTTAACTCGCAAAGATTATGTTGATGGAGCAATAAATACCGTTACAACAAATGCGAACTCTAGGGTGTTACGATCTGGCGACACTATGACAGGTAATTTAACTGCGCCAAACCTTTTTTCACAGAATCCTGCATCTCAACCTTCACATGTTCCACGATTTGACCAAATCGTAATTAAGGATTCTGTTCAAGATTTCGGCTATTATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b7449c2818bf493f989b1900a5b195648e67d319a540b7b3c7d0df5508af80fc
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6475
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Three novel Salmonella bacteriophage and their application in different food matrices Li,Y., Lv,P., Shi,D., Zhao,H., Yuan,X., Jin,X. and Wang,X. 2018-09 — GenBank