Protein

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Genbank accession
XHB37319.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect2
Probability 0,61
Protein sequence
MSTQVKNVEMPYGLTMTGEQVFEGRVVAKGGIKLEGTLEFEANTTLGTANNRLTGIWTGYINAASGFRLKGGFVFDEDGTTSIGTSSVRANMIFAKGVDLEDGLIMKGGIAFTDDNNSNFGSTTKRAKTIFTNAIDIANGILLKGGLSLADGNTNIGSTTTKVNKIFVQDAQADKVSVGSEGVVGTTSLKFTTNTGVKLQHVIGANTYDIYTTGNKPSWSDVGGTDYMSKSGNVLTLAELNEIIPKTDKAVKLGRTGLRLSEVWSEIYRGKDVDIEGDYKVAGVRQPVWRSGTAAPVDSVGKDGDFYVKRSA
Physico‐chemical
properties
protein length:312 AA
molecular weight: 33143,87010 Da
isoelectric point:6,64336
aromaticity:0,07692
hydropathy:-0,22500

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_VpaS_SD25
[NCBI] 		3326590 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio parahaemolyticus
[NCBI] 		670 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XHB37319.1 [NCBI]
Genbank nucleotide accession
PQ249004 [NCBI]
CDS location
range 97865 -> 98803
strand -
CDS
ATGAGTACACAAGTTAAAAACGTTGAAATGCCCTATGGGTTGACCATGACTGGTGAACAGGTATTTGAAGGCCGTGTCGTTGCCAAGGGTGGTATTAAACTCGAAGGTACGTTAGAGTTTGAAGCCAATACAACATTAGGTACTGCTAACAACCGATTAACCGGTATATGGACTGGTTACATCAATGCTGCTTCAGGTTTCCGACTTAAGGGTGGGTTTGTTTTCGATGAAGACGGTACAACCAGTATCGGCACATCGTCAGTTCGAGCGAATATGATTTTTGCCAAAGGTGTCGACCTTGAAGATGGTCTCATCATGAAAGGTGGTATTGCTTTCACTGATGATAATAACAGCAATTTTGGTAGTACAACAAAACGTGCCAAGACTATCTTTACTAATGCGATTGATATCGCCAACGGTATCCTTCTTAAAGGTGGATTGTCTTTGGCTGATGGCAATACAAATATTGGTAGTACGACCACTAAGGTTAATAAAATATTTGTACAGGATGCACAAGCTGATAAAGTATCCGTCGGAAGCGAGGGCGTCGTTGGTACAACTAGTCTAAAGTTTACAACTAATACTGGGGTTAAGCTTCAACATGTGATCGGTGCTAACACATATGATATCTATACAACTGGTAACAAACCAAGTTGGTCAGATGTAGGCGGAACCGATTATATGTCAAAATCTGGTAATGTGTTAACATTGGCAGAATTAAATGAAATCATCCCGAAGACCGATAAAGCCGTGAAACTTGGTCGCACAGGATTGCGATTAAGTGAAGTGTGGTCAGAAATCTATCGCGGTAAAGATGTAGACATCGAAGGTGACTATAAAGTTGCTGGTGTGCGTCAACCTGTATGGCGAAGTGGTACTGCTGCACCGGTCGATTCTGTTGGCAAGGATGGTGATTTTTACGTTAAACGGAGCGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d26dca7873a78d81559b5e78312cc437c78273de11b934c155beb6ad8c68e2c5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8015
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic analysis of Vibrio parahaemolyticus phages Li,X., Chen,D. and Li,Y. 2023-06 — GenBank