Protein

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Genbank accession
XAO36622.1 [GenBank]
Protein name
structural protein
RBP type
TSP
Evidence DepoScope
Probability 0,98
Protein sequence
MAHEIGTATNFEDFFSKIVAFLTTNATLVADGQAWQALRVRRDNIATFTSSLPDNYTGNGRKQIHTFRYDPRSLNINNPTGNNQESFWFTNSGYSPGNSYSQWVLRTAREVKTVRLRAPIGSSYASYAPKSFRLQYSDDGSSWTTALTVSNAPNWSAGERRDFAVPGTPGSHLYWKIIWDATQVVSYIGWQELLLLEADETVANHFGSEVILKALGNSGLDEIYTGIRAEYDSAAGWYNLFMNGYTGYDSNEMSWFNQPGALPGYGAQYTRATPMVPLWNTTMPYWMVASGRSFRFCVKVGTNYEGGYLGFILPYATPNQYPYPLAVGGSLCPLNDTSRSAEWRYSYVSFTHGVYPGPGTQNYPESEANWATLYLRSPEGAWNYHGNRSSYGSSNSEGIGGPTVSSSPPYNLNTTNAGLRNVWPHCMNGQWSSGLRPYRECLGGGYILQPCVLIQRSPAQVLGELEGTFAISGYQNSAENTTVFNGKTHVVFQNAYRNTIHEHWALSMD
Physico‐chemical
properties
protein length:509 AA
molecular weight: 56627,98710 Da
isoelectric point:6,22008
aromaticity:0,14145
hydropathy:-0,44303

Domains

Domains [InterPro]
DC_0072
STR
1–509
DC_0072
G3DSA:2.60.120.260
STR
71–183
G3DSA:2.60.120.260
IPR008979
STR
81–179
IPR008979
XAO36622.1
1 509
Architecture
STR
STR 1-509
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XAO36622.1
1 509
Domain Start End Length (AA) Confidence
N-terminal 1 38 38 0,1298
Central domain 39 237 200 0,6862
C-terminal 238 509 271 0,9525
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-38
Central
39-237
C-terminal
238-509

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage PC1
[NCBI] 		3136766 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa PAO1
[NCBI] 		208964 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XAO36622.1 [NCBI]
Genbank nucleotide accession
PP596838 [NCBI]
CDS location
range 45717 -> 47246
strand -
CDS
ATGGCACACGAAATCGGAACCGCGACGAACTTTGAGGACTTCTTCAGCAAGATCGTCGCCTTTCTTACCACGAACGCGACCCTGGTGGCGGATGGTCAGGCTTGGCAGGCGCTGCGCGTCCGCCGGGACAACATCGCAACCTTCACCAGTAGCCTCCCCGATAATTACACGGGGAACGGTCGGAAGCAAATTCACACCTTCCGCTATGACCCCCGGTCACTGAATATCAACAACCCCACAGGAAACAACCAGGAGTCCTTCTGGTTCACCAACTCGGGCTACTCCCCGGGAAACAGTTACAGTCAATGGGTTCTTCGGACGGCCCGCGAAGTGAAAACGGTCCGCCTGCGTGCGCCCATCGGGAGCAGTTATGCTTCCTACGCCCCAAAATCCTTCCGGCTCCAATACTCGGATGACGGGTCATCCTGGACTACGGCCCTGACCGTCTCGAACGCGCCGAACTGGTCCGCCGGGGAGCGCCGGGACTTCGCCGTGCCCGGCACCCCCGGTTCGCACCTGTATTGGAAGATCATCTGGGACGCGACCCAGGTGGTGAGCTACATAGGGTGGCAGGAACTCCTCCTGCTCGAAGCGGATGAAACGGTGGCCAACCACTTTGGGTCGGAGGTCATCCTAAAGGCCCTGGGCAACTCGGGTCTGGACGAAATCTACACCGGCATCCGGGCGGAGTACGACAGCGCAGCGGGTTGGTACAACCTGTTCATGAACGGGTACACTGGCTATGACTCCAACGAAATGTCTTGGTTTAACCAGCCTGGAGCCCTCCCTGGCTACGGGGCGCAATACACTCGGGCAACCCCGATGGTGCCGCTGTGGAACACCACCATGCCGTACTGGATGGTGGCTTCGGGCCGCTCCTTCCGGTTCTGTGTCAAGGTCGGCACGAACTATGAGGGGGGCTATCTTGGTTTCATTCTCCCGTATGCTACGCCCAATCAATACCCGTACCCGCTCGCTGTCGGTGGTTCCCTCTGCCCCCTCAACGACACCTCCCGGTCCGCGGAGTGGCGTTATTCATACGTGAGCTTCACCCACGGCGTGTATCCCGGGCCGGGCACTCAGAACTACCCGGAAAGCGAAGCGAACTGGGCAACCCTTTACCTGCGCAGCCCGGAAGGAGCGTGGAACTACCACGGCAACCGTTCGTCCTACGGTTCGTCCAACTCCGAAGGCATAGGTGGTCCGACCGTCAGCAGCTCGCCTCCCTACAACCTCAACACCACCAACGCCGGTTTGCGCAACGTCTGGCCTCACTGCATGAACGGCCAGTGGTCCTCGGGCCTGCGCCCCTACCGCGAGTGCTTGGGCGGCGGGTATATTCTCCAGCCTTGCGTGCTGATTCAGCGGTCGCCTGCCCAAGTCCTCGGGGAGCTGGAGGGGACGTTTGCAATCAGCGGCTACCAAAACAGCGCGGAGAACACGACCGTGTTCAACGGCAAGACTCACGTGGTGTTCCAGAATGCTTACCGCAACACGATCCACGAGCACTGGGCGCTGTCGATGGATTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
5387d40bb3b89b14f5a5abb207be3d883a2ef89b9f95d76a53c23d250971e6c0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6530
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Combinations of novel bacteriophage are efficacious against Multidrug-resistant Pseudomonas aeruginosa and enhance sensitivity to carbapenem antibiotics Kovacs,C.J., Rapp,E.M., Rankin,W.R., McKenzie,S.M., Brasko,B.K., Hebert,K.E., Bachert,B.A., Kick,A.R., Burpo,F.J. and Barnhill,J.C. 2024-06-21 — GenBank