Protein

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Genbank accession
WVX90592.1 [GenBank]
Protein name
head protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,93
Protein sequence
MFILDNLKLKLHSYFSQKFISQLQQNFEEIYYAYYNFDKDFRNHLNTDSNAHTSSQIDHTTRKGNKVKLSNHENYQDELIEHLVLGHNGDGIQELRTSHVSMDAQSFDSLHERLYHDFLNESNAREELRADLTKKIQRVVNVDDFGGDPTGQKDSTKAFQDALGNGNVQVTMSGGTYLTTGIKMPNNSRLVGQGKDITTIKFMDITPAENIGITNLKMSGNAENISLESFSFNGNKFRQNGTLQPSGGSRSSNIRFAGVTNGYIYNVKSYDALLHCIDVTYANDDYYYEGDGNRVPSTLESRHIHIDNCEVYGHGDDGITTHHSRYLTITNCYSHHPTIGKGNNNGIEVDDGSQFVFLDGNRTQGNFGGIEIKAHAPTSAAAGVFVSNHLSIGDLRSYNIRHIGHHRAKTDKRSLTAYNVALNNCMALYPVYNGTYPGSSARALVISGYTNVSVNNFTAIGNSDFNKIDGGKTDNNMPVIAVQFMAENVTLNNITVKGFTTAGKDIEFIGGGNRGQRFILNNVNIYNSSNKVGIASGGGIYDLKITNANLKGNGSGNGIQLINNRTVISGVTADNYTNAALIAGEKYSVVPTVFKGGISIGSTGSAATAETSAVIASTGGSRAYSTRSYVLGSGQKSIAYGSRSSIMNSLQSETQKGGHTQMVINSRNVKAPGNYHIVGGYSDKGSASTSNIKWDLSSYSGDLTLSGKLKQDSADIAELFESQNGLAIDLGTIVTLDGDKIRKAQPSDVPIGVISGTAALVANEKTFHHKDRFLKNEYGVTITEHKQVEFTDDEGNITYEWRDVPVENPDYDPKIDYVSRSDRPEWNTVGLLGQIYTNVEKDVISGDYINGRAGVGFKDNVNGKGRVMKITSPYNEQRGCAIALVLWGAK
Physico‐chemical
properties
protein length:890 AA
molecular weight: 97064,32220 Da
isoelectric point:6,40816
aromaticity:0,08539
hydropathy:-0,48045

Domains

Domains [InterPro]
DC_0125
ATT
2–246
DC_0125 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR021865
IPR012334
STR
123–595
IPR012334 G3DSA:2.40.300.10
IPR011050
STR
133–460
IPR011050 G3DSA:4.10.80.40
DC_0616
STR
370–661
DC_0616
WVX90592.1
1 890
Architecture
ATT
STR
CHP
RBD
ATT 2-246 | STR 247-661 | CHP 662-714 | RBD 715-886 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WVX90592.1
1 890
Domain Start End Length (AA) Confidence
N-terminal 1 154 154 0,9916
Central domain 155 673 520 0,9573
C-terminal 674 890 216 0,9378
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-154
Central
155-673
C-terminal
674-890

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage SU1
[NCBI] 		3110551 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Xanthomonas campestris pv. campestris
[NCBI] 		340 Bacteria > Proteobacteria > Gammaproteobacteria > Xanthomonadales > Xanthomonadaceae > Xanthomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WVX90592.1 [NCBI]
Genbank nucleotide accession
OR842880 [NCBI]
CDS location
range 32658 -> 35330
strand +
CDS
ATGTTTATTTTAGACAATTTAAAATTAAAACTTCACTCGTATTTCAGTCAGAAGTTTATTAGTCAGTTGCAACAAAACTTCGAAGAAATCTATTACGCTTACTATAACTTTGACAAAGATTTTAGAAACCATTTGAATACAGATTCAAACGCTCATACATCTAGTCAAATAGATCATACTACTAGAAAAGGGAACAAAGTTAAATTATCAAATCATGAGAACTATCAAGATGAACTCATTGAACATCTTGTGTTAGGTCATAATGGTGACGGTATTCAAGAATTAAGAACAAGCCATGTGTCAATGGACGCACAAAGTTTTGATTCGTTACACGAACGTCTTTATCACGATTTTTTAAATGAGAGTAATGCACGAGAGGAATTAAGAGCAGACTTAACTAAGAAAATTCAACGTGTGGTTAATGTTGATGATTTCGGCGGTGACCCAACAGGTCAAAAAGATAGCACTAAAGCATTCCAAGATGCATTAGGAAATGGTAATGTACAAGTTACTATGAGTGGTGGTACTTACTTAACTACAGGTATAAAAATGCCTAATAACTCAAGATTAGTAGGTCAGGGTAAAGATATAACCACTATTAAATTTATGGACATTACACCTGCCGAAAACATAGGTATTACTAACTTAAAAATGAGTGGTAATGCAGAGAATATCTCACTGGAAAGTTTTTCTTTCAATGGGAATAAATTTAGACAAAACGGAACGCTACAGCCATCTGGTGGTTCTAGATCATCTAACATCAGATTTGCAGGCGTTACAAACGGATATATCTATAACGTTAAGTCGTATGACGCATTATTACATTGTATCGATGTAACTTATGCTAATGATGATTATTACTATGAGGGCGATGGAAACAGAGTCCCTAGTACATTAGAAAGTCGCCACATTCACATTGATAATTGTGAAGTTTATGGACACGGCGATGACGGTATAACAACTCACCATTCAAGATATTTAACAATTACTAATTGTTATTCTCATCACCCTACCATCGGTAAAGGCAATAATAACGGTATTGAAGTAGATGATGGTTCACAATTTGTATTCCTAGATGGTAATAGAACACAAGGTAATTTCGGTGGTATTGAAATCAAAGCGCATGCGCCAACAAGCGCAGCAGCTGGAGTTTTTGTTAGTAATCATTTATCAATTGGTGATTTAAGAAGTTATAACATTAGACATATTGGTCATCATAGAGCGAAAACAGATAAACGAAGTTTAACAGCCTATAACGTGGCGCTTAATAATTGTATGGCTTTATATCCTGTATACAACGGAACTTATCCAGGTTCTAGTGCTAGGGCATTAGTTATTTCCGGTTATACTAATGTTTCTGTAAATAACTTCACTGCTATAGGTAACAGTGATTTCAATAAGATTGACGGTGGTAAAACAGATAATAATATGCCCGTTATTGCCGTTCAATTTATGGCAGAAAACGTCACTTTAAATAACATCACTGTTAAAGGATTTACCACTGCCGGTAAAGATATCGAATTTATTGGTGGAGGCAATAGGGGTCAAAGATTCATTTTAAACAATGTAAACATCTATAATTCATCAAATAAAGTCGGTATCGCTAGTGGTGGAGGTATTTATGATTTAAAAATCACTAATGCAAACTTAAAAGGTAATGGTAGCGGTAACGGTATTCAATTAATTAATAACAGAACAGTTATAAGTGGTGTTACTGCAGACAATTATACTAATGCAGCTTTAATTGCAGGCGAAAAATACAGTGTTGTACCTACAGTTTTTAAAGGTGGCATAAGTATCGGTTCTACTGGTAGTGCGGCAACTGCAGAAACAAGTGCGGTCATTGCGTCTACTGGTGGTTCCAGAGCATATAGCACTCGTAGTTATGTTCTTGGTTCTGGACAAAAATCAATCGCTTATGGTTCACGTTCTAGTATTATGAATTCGTTACAGTCCGAAACACAAAAAGGCGGACATACACAAATGGTTATTAATAGCCGTAATGTTAAGGCACCAGGCAACTATCACATTGTTGGGGGGTATTCTGACAAAGGTTCCGCATCGACTTCAAATATCAAATGGGATTTAAGTTCCTATAGTGGTGACTTAACATTGTCTGGTAAACTCAAACAAGATAGCGCCGATATTGCCGAGTTATTCGAGTCTCAAAACGGACTTGCTATTGATTTAGGGACTATTGTAACTTTGGATGGTGATAAAATTAGAAAAGCACAACCTAGTGATGTGCCAATAGGTGTTATTTCTGGAACTGCTGCATTAGTAGCTAATGAGAAAACATTCCATCACAAAGACAGATTCCTTAAAAACGAATACGGCGTGACGATTACCGAACACAAACAAGTTGAGTTTACTGACGATGAAGGTAATATCACTTATGAATGGCGAGATGTACCTGTAGAAAATCCAGACTATGACCCTAAAATTGATTACGTTTCTCGTTCAGATCGTCCTGAATGGAATACAGTAGGATTACTTGGTCAAATATACACAAACGTAGAAAAAGATGTTATATCAGGTGATTATATCAATGGTCGAGCAGGTGTTGGTTTCAAGGATAATGTGAATGGTAAAGGTAGAGTAATGAAGATTACATCTCCTTATAACGAACAACGTGGTTGTGCTATAGCATTAGTATTGTGGGGTGCTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
32a6ffb5d6a99a8a1ba2840781a67eab92bf25ce3d78038e5f8305ed2b2a4df8
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3204
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50