Protein

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Genbank accession
XTJ60829.1 [GenBank]
Protein name
autotransporter adhesin
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,86
TSP
Evidence RBPdetect2
Probability 0,92
Protein sequence
MPHLKAYDKYGNILAIGYNVELHEEVGSVIIPNLAPHTHYPQGEFYVSEINFKNNTLRSTNTALDKAIFLNFVVDSTITNNDIKTDKGNDSLSVQGSCSNLFVLNNSMNKNLSISSNAFNVISKDNIAYNLPKVLNGTAIPTTGSCRLGDIVVNTSRTLTSGSPEKWICTSDGVATNMKGTPNTDYTQGQIVYNGNYVYKAVASGTSGGTQPTHNNGVISDGSILWEFISTKASF
Physico‐chemical
properties
protein length:235 AA
molecular weight: 25386,01860 Da
isoelectric point:6,18172
aromaticity:0,08511
hydropathy:-0,25404

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XTJ60829.1
1 235
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0118
Central domain 11 200 191 0,6129
C-terminal 201 235 34 0,9978
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-200
C-terminal
201-235

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage SAP_01
[NCBI] 		3419001 Viruses >
Host Staphylococcus aureus
[NCBI] 		1280 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XTJ60829.1 [NCBI]
Genbank nucleotide accession
PV580076 [NCBI]
CDS location
range 81263 -> 81970
strand +
CDS
ATGCCACACTTAAAAGCATATGATAAATACGGTAATATATTGGCAATAGGTTACAATGTAGAGTTACATGAAGAAGTAGGGTCTGTCATTATTCCTAACTTAGCCCCTCATACACACTATCCACAAGGTGAATTTTACGTGTCAGAAATTAACTTTAAAAATAATACATTAAGAAGTACAAATACTGCTTTGGATAAAGCTATATTCTTAAATTTTGTTGTGGATAGTACAATTACTAATAATGATATAAAAACAGATAAAGGTAATGATTCATTAAGTGTTCAAGGTTCTTGTAGTAATTTATTCGTATTAAATAATAGTATGAATAAAAACTTAAGTATTTCTAGTAATGCATTTAATGTTATAAGTAAGGATAACATAGCTTATAATTTACCTAAAGTACTGAACGGTACTGCAATACCAACTACAGGAAGTTGTAGATTGGGAGATATTGTTGTTAATACTAGTAGAACCCTAACATCAGGTAGTCCTGAGAAATGGATATGTACTAGCGATGGAGTTGCTACTAATATGAAGGGGACACCTAATACGGATTATACACAAGGTCAAATTGTTTATAATGGGAATTATGTATATAAAGCAGTAGCTTCAGGTACAAGTGGTGGAACACAACCTACTCATAATAACGGTGTTATATCAGATGGCTCTATACTGTGGGAATTTATATCCACAAAAGCTAGTTTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b2bf1343929ef69782aba6576019ad9908fb4cc71352d9e96da76a5a49c0219a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7861
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50