Protein

View in Explore
Genbank accession
BES79802.1 [GenBank]
Protein name
structural protein
RBP type
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MQTYILGRTVEFTDLEDLKAKVDAIHEELHYDWNVILGTVTEILSVEILNKISQMRVGEEFTIALQTSPSGLPLNKFEVSVTPAELGSLTGNKLLAEATGDLVLKIEVDGNPDVSDTMTVKVLAAAVPVASIDATDISGVVGDTGTLSTTVLPAEATDKSVTIVSKDATVATINDAGAWELKKVGSTTADITSVSTPSVKKTINITVAKAPVPVTSITADNISGEVGATGTINYAVLPADADNKSVKFTSKDTAKVTVNADTGAYQLKAEGSTTIDIVSVENGSIKKTITVTITAASGG
Physico‐chemical
properties
protein length:299 AA
molecular weight: 30966,63710 Da
isoelectric point:4,52821
aromaticity:0,03344
hydropathy:0,13779

Domains

Domains [InterPro]
G3DSA:2.60.40.1080
STR
125–209
G3DSA:2.60.40.1080 G3DSA:2.60.40.1080
IPR003343
STR
126–205
IPR003343 DC_1711
DC_1711
RBD
130–218
DC_1711
IPR008964
RBD
132–207
IPR008964 IPR003343
IPR003343
STR
212–289
IPR003343
IPR008964
RBD
217–293
IPR008964
BES79802.1
1 299
Architecture
STR
STR 125-298 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Yersinia phage vB_Yru_GN1
[NCBI] 		3074381 Uroviricota > Caudoviricetes > Caudoviricetes incertae sedis > Sepahanvirus vB-Yru-GN1 >
Host Yersinia ruckeri
[NCBI] 		29486 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BES79802.1 [NCBI]
Genbank nucleotide accession
LC779065 [NCBI]
CDS location
range 20136 -> 21035
strand +
CDS
ATGCAAACTTATATCCTAGGTAGAACGGTGGAGTTTACTGATCTTGAAGACCTGAAAGCTAAGGTTGATGCTATTCATGAAGAATTGCATTATGACTGGAATGTTATTTTAGGTACTGTCACTGAAATTCTATCTGTAGAAATTCTGAATAAGATTTCTCAGATGCGTGTAGGTGAAGAATTCACGATCGCATTGCAGACTTCTCCATCAGGACTTCCACTGAACAAATTTGAAGTATCAGTAACTCCTGCTGAATTAGGTAGCCTGACTGGTAATAAATTACTGGCTGAAGCTACTGGTGATCTAGTTCTGAAAATTGAAGTAGATGGTAATCCAGATGTTTCTGATACCATGACTGTTAAAGTCCTAGCTGCTGCAGTTCCAGTAGCTAGCATTGATGCAACTGATATTAGTGGAGTAGTAGGAGATACTGGTACTTTAAGTACTACAGTCCTTCCTGCTGAGGCTACTGATAAGTCAGTAACTATCGTATCTAAAGATGCGACTGTAGCTACCATCAATGATGCTGGTGCATGGGAATTGAAGAAAGTTGGTAGTACTACTGCTGACATTACTTCAGTATCTACTCCATCAGTCAAGAAAACGATCAATATCACTGTAGCTAAGGCACCTGTCCCAGTTACTTCTATTACTGCTGATAATATTAGTGGTGAAGTTGGAGCTACTGGTACTATCAACTATGCAGTACTGCCAGCTGATGCTGACAATAAATCAGTTAAATTCACTTCGAAAGATACTGCTAAAGTTACTGTTAATGCTGATACTGGAGCTTATCAACTTAAAGCTGAAGGTTCCACTACGATTGATATCGTATCTGTTGAAAATGGTTCTATTAAGAAAACCATCACTGTTACCATCACTGCTGCTAGTGGAGGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f502f6fbc83b70c6cec248e978d30756514adf91f518b295095450c0ced93e27
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9194
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Analysis of phage genome (vB_Yru_GN1) of the bacterium (Yersinia ruckeri) Ganjoor,M.S., Bouzari,M. and Soleimani-Delfan,A. 2017-05-02 — GenBank