Protein

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Genbank accession
ACL78381.1 [GenBank]
Protein name
gp12 Short tail fibers
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MSTNTLKHISDKSEFKSFDPTGSNFPPDITNVQEALATISLIGVTGNVPSATETSQGIIRLATTQEVMDGLDAYSAVTPATLKARLDIPTQATETYVGITRYATNAEAIAGTEPQAAIVATSLKAVMDYTFENRLSTENATGVIKISTTPAALAGTDDTTAMSPLKVSQAIGAATAALPVYSTATTTNEGLVRLATNAEVGNGSLSVGIAISPAGLATLTSTEARSGIIKLAGWDMVSNGTDHTAAVTPASLLARTGNTGRIGLVRLSTTVGQGDGNTALAYNANVISTSGGEIWGTLNVNGTLRRNGVDVVTHDQLSDSVPVGTICMWGGHEGNIPGKWRACVGGTYTGGAYLNAVGGRWGWWGAIPDFRGLYPRGANMVGGYSEGEVNPHIAGNRGEDGKGKARLGNGVGSFPQSSVQAQALRYHKHAGGFGEHDNYGAFGNTANSGYVGTRKGLDWDNRSYYTNEGFETTEPWNRDGHTTLNSEGLIANETRPWTMSVLFIIKVE
Physico‐chemical
properties
protein length:508 AA
molecular weight: 53043,26130 Da
isoelectric point:5,55757
aromaticity:0,06890
hydropathy:-0,20906

Domains

Domains [InterPro]
DC_0176
STR
1–421
DC_0176
SSF69349
STR
248–333
SSF69349 IPR044916
G3DSA:2.10.280.10
Unmapped
248–285
G3DSA:2.10.280.10 SSF88874
IPR015173
STR
251–309
IPR015173 IPR027448
ACL78381.1
1 508
Architecture
STR
STR 1-507 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage JS10
[NCBI] 		576790 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Dhakavirus
Host Escherichia coli K-12
[NCBI] 		83333 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ACL78381.1 [NCBI]
Genbank nucleotide accession
EU863409.1 [NCBI]
CDS location
range 87860 -> 89386
strand +
CDS
ATGTCAACAAACACACTAAAACACATTAGTGATAAATCGGAATTCAAATCATTCGACCCTACTGGGTCGAATTTCCCGCCTGATATTACTAATGTTCAAGAAGCATTGGCAACTATTTCATTAATCGGCGTCACAGGTAATGTTCCTTCAGCCACAGAAACGTCCCAAGGCATTATTCGTCTTGCCACCACACAAGAAGTAATGGATGGATTGGATGCTTATAGTGCAGTGACTCCGGCAACTTTAAAAGCTCGTTTAGATATTCCTACTCAGGCAACAGAAACTTATGTAGGTATCACCCGTTATGCTACTAACGCTGAAGCCATAGCAGGCACAGAGCCCCAGGCTGCAATCGTAGCAACCTCTTTGAAAGCGGTAATGGATTATACATTTGAGAACCGTTTATCAACAGAGAACGCCACAGGCGTTATCAAGATTTCAACTACACCTGCTGCATTAGCTGGTACCGATGATACCACAGCAATGTCCCCACTTAAAGTATCGCAAGCAATTGGTGCGGCCACAGCAGCGTTACCGGTTTATTCTACGGCAACGACCACAAATGAAGGTTTGGTTCGTTTAGCTACTAATGCTGAAGTTGGCAATGGAAGTCTTTCGGTAGGTATTGCTATTTCTCCAGCCGGATTAGCCACATTAACTTCCACCGAAGCCAGAAGTGGTATTATTAAACTCGCAGGTTGGGATATGGTATCTAATGGTACTGACCATACTGCCGCTGTTACTCCGGCATCTTTGCTAGCTCGTACAGGTAATACAGGACGAATTGGCTTGGTTCGTTTATCTACTACAGTTGGACAAGGCGATGGTAATACGGCCCTGGCTTATAATGCTAACGTTATTTCTACTTCAGGTGGTGAAATATGGGGTACTTTAAACGTTAATGGCACATTACGTCGTAATGGTGTTGATGTTGTTACCCACGACCAATTATCAGATAGCGTTCCGGTAGGTACTATTTGTATGTGGGGTGGACATGAAGGTAATATCCCAGGCAAATGGCGAGCTTGTGTAGGTGGGACTTATACTGGCGGTGCATATTTAAATGCTGTTGGCGGACGTTGGGGATGGTGGGGTGCTATTCCAGATTTCCGTGGATTATATCCTCGCGGTGCTAACATGGTCGGTGGATATTCTGAAGGTGAAGTTAACCCACATATTGCCGGTAACCGAGGAGAAGACGGTAAAGGTAAAGCCCGTTTAGGTAACGGTGTAGGTTCGTTCCCACAATCTTCTGTTCAAGCCCAAGCATTACGTTATCATAAACACGCCGGTGGTTTTGGTGAACATGATAACTATGGTGCTTTTGGTAACACCGCTAACTCTGGGTATGTTGGTACTCGTAAAGGACTTGACTGGGATAACCGTAGTTATTATACTAACGAAGGGTTTGAGACCACTGAACCTTGGAACCGTGATGGCCATACCACACTGAATAGTGAAGGACTTATTGCAAATGAAACACGTCCTTGGACAATGTCCGTTCTTTTTATTATTAAAGTAGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
fa5e63535ce8453a5b1ef8879d729d959a08ad970237a0c2ade8fd43f2e34c0a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6753
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50